Parental gene:

BUD31, ENSPPYG00000017376

Aliases:None
Description:BUD31 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29629]
Organism:Orangutan (Pongo abelii)
Coordinates:7:8316155..8324591(+)


>ENSPPYG00000017376
ATGCCTAAAGTCAAAAGAAGCCGGAAAGCACCCCCAGATGGCTGGGAGTTGATTGAGCCAACACTGGATGAATTAGATCA
AAAGATGAGAGAAGCTGAAACAGAACCGCATGAGGGAAAGAGGAAAGTGGAATCCCTGTGGCCCATCTTCAGGATCCACC
ACCAGAAAACCCGCTACATCTTCGACCTCTTTTACAAGCGGAAAGCCATCAGCAGAGAACTCTATGAATATTGTATTAAA
GAAGGCTATGCAGACAAAAACCTGATTGCAAAATGGAAAAAGCAAGGGTATGAGAACTTGTGCTGCCTGCGGTGCATTCA
GACACGGGACACCAACTTCGGGACGAACTGCATCTGCCGCGTGCCCAAAAGCAAACTGGAAGTGGGCCGCATCATCGAGT
GCACACACTGTGGCTGCCGTGGCTGCTCTGGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .69 RPM
SRP007412_cerebellum 6 .57 RPM
SRP007412_heart 2 .68 RPM
SRP007412_kidney 5 .20 RPM
SRP007412_liver 5 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006269 ortholog_one2one 2 retrogenes
retro_amel_1325, retro_amel_997,
Bos taurus ENSBTAG00000020439 ortholog_one2one 1 retrogene
retro_btau_1066,
Choloepus hoffmanni ENSCHOG00000004055 ortholog_one2one 1 retrogene
retro_chof_1013,
Dipodomys ordii ENSDORG00000000739 ortholog_one2one 1 retrogene
retro_dord_58,
Equus caballus ENSECAG00000024151 ortholog_one2one 2 retrogenes
retro_ecab_254, retro_ecab_672,
Ficedula albicollis ENSFALG00000013804 ortholog_one2one 1 retrogene
retro_falb_27,
Homo sapiens ENSG00000106245 ortholog_one2one 1 retrogene
retro_hsap_4712,
Gorilla gorilla ENSGGOG00000015119 ortholog_one2one 1 retrogene
retro_ggor_2928,
Loxodonta africana ENSLAFG00000012201 possible_ortholog 1 retrogene
retro_lafr_24,
Macropus eugenii ENSMEUG00000006920 ortholog_one2one 1 retrogene
retro_meug_446,
Microcebus murinus ENSMICG00000017426 ortholog_one2one 2 retrogenes
retro_mmur_470, retro_mmur_622,
Nomascus leucogenys ENSNLEG00000011020 ortholog_one2one 1 retrogene
retro_nleu_2053,
Pan troglodytes ENSPTRG00000019451 ortholog_one2one 1 retrogene
retro_ptro_2735,
Pteropus vampyrus ENSPVAG00000007527 ortholog_one2one 1 retrogene
retro_pvam_474,
Rattus norvegicus ENSRNOG00000000989 ortholog_one2one 1 retrogene
retro_rnor_1852,
Tupaia belangeri ENSTBEG00000010640 ortholog_one2one 2 retrogenes
retro_tbel_2683, retro_tbel_4119,
Tursiops truncatus ENSTTRG00000003005 ortholog_one2one 1 retrogene
retro_ttru_815,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3313 62.83 78.47
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2. retro_pabe_3660 74.29 72.92
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Download FASTA sequences of all ENSPPYG00000017376 retrocopies