Parental gene: | PARK7, ENSPTRG00000000102 |
| Aliases: | None |
| Description: | parkinson protein 7 [Source:HGNC Symbol;Acc:16369] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:7968236..7991742(+) |
>ENSPTRG00000000102
ATGGCTTCCAAAAGAGCTCTGGTCATCCTGGCTAAAGGAGCAGAGGAAATGGAGACGGTCATCCCTGTAGATGTCATGAG
GCGAGCTGGGATTAAGGTCACCATTGCAGGCCTGGCTGGAAAAGACCCAGTACAGTGTAGCCGTGATGTGGTCATTTGTC
CTGATGCCAGTCTTGAAGATGCAAAAAAAGAGGGACCATATGATGTGGTGGTTCTACCAGGAGGTAATCTGGGTGCACAG
AATTTATCTGAGTCTGCTGCTGTGAAGGAGATACTGAAGGAGCAGGAAAACCGGAAGGGCCTGATAGCCGCCATCTGTGC
AGGTCCTACTGCTCTGTTGGCTCATGAAATAGGTTTTGGAAGTAAAGTTACAACACACCCTCTTGCTAAAGACAAAATGA
TGAATGGAGGTCATTACACCTACTCTGAGAATCGTGTGGAAAAAGACGGCCTGATTCTTACAAGCCGGGGGCCTGGGACC
AGCTTCGAGTTTGCGCTTGCAATTGTTGAAGCCCTGAATGGCAAGGAGGTGGCAGCTCAAGTGAAGGCTCCACTTGTTCT
TAAAGACTAG
ATGGCTTCCAAAAGAGCTCTGGTCATCCTGGCTAAAGGAGCAGAGGAAATGGAGACGGTCATCCCTGTAGATGTCATGAG
GCGAGCTGGGATTAAGGTCACCATTGCAGGCCTGGCTGGAAAAGACCCAGTACAGTGTAGCCGTGATGTGGTCATTTGTC
CTGATGCCAGTCTTGAAGATGCAAAAAAAGAGGGACCATATGATGTGGTGGTTCTACCAGGAGGTAATCTGGGTGCACAG
AATTTATCTGAGTCTGCTGCTGTGAAGGAGATACTGAAGGAGCAGGAAAACCGGAAGGGCCTGATAGCCGCCATCTGTGC
AGGTCCTACTGCTCTGTTGGCTCATGAAATAGGTTTTGGAAGTAAAGTTACAACACACCCTCTTGCTAAAGACAAAATGA
TGAATGGAGGTCATTACACCTACTCTGAGAATCGTGTGGAAAAAGACGGCCTGATTCTTACAAGCCGGGGGCCTGGGACC
AGCTTCGAGTTTGCGCTTGCAATTGTTGAAGCCCTGAATGGCAAGGAGGTGGCAGCTCAAGTGAAGGCTCCACTTGTTCT
TAAAGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 89 .09 RPM |
| SRP007412_cerebellum | 38 .57 RPM |
| SRP007412_heart | 23 .49 RPM |
| SRP007412_kidney | 47 .70 RPM |
| SRP007412_liver | 35 .39 RPM |
| SRP007412_testis | 18 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003703 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000019674 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004364 | ortholog_one2one | 7 retrogenes | |
| Callithrix jacchus | ENSCJAG00000000319 | ortholog_one2many | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000013141 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010915 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000116288 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012105 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000008470 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008790 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016511 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002151 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001925 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018289 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009474 | ortholog_one2one | 13 retrogenes | |
| Tarsius syrichta | ENSTSYG00000001455 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000011076 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_755 | 82.81 | 66.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2848 | 76.44 | 99.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_3270 | 99.47 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000102 retrocopies