Parental gene:

GSTM3, ENSPTRG00000001063

Aliases:None
Description:Pan troglodytes glutathione S-transferase mu 3 (brain) (GSTM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001246568]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:127112270..127118860(+)


>ENSPTRG00000001063
ATGTCGTGCGAGTCGTCTATGGTTCTCGGGTACTGGGATATTCGTGGGCTGGCGCACGCCATCCGCCTGCTCCTGGAGTT
CACGGATACCTCTTATGAGGAGAAACGGTACACGTGCGGGGAAGCTCCTGACTATGATCGAAGCCAATGGCTGGATGTGA
AATTCAAGCTAGACCTGGACTTTCCTAATCTGCCCTACCTCCTGGATGGGAAGAACAAGATCACCCAGAGCAATGCCATC
TTGCGCTACATCGCTCGCAAGCACAACATGTGTGGTGAGACTGAAGAAGAAAAGATTCGAGTGGACATCATAGAGAACCA
AGTAATGGATTTCCGCACACAACTGATAAGGCTCTGTTACAGCTCTGACCACGAAAAACTGAAGCCTCAGTACTTGGAAG
AGCTACCTGGACAACTGAAACAATTCTCCATGTTTCTGGGGAAATTCTCATGGTTTGCTGGGGAAAAGCTCACCTTTGTG
GATTTTCTCACCTATGATATCTTGGATCAGAACCGTATATTTGACCCCAAGTGCCTGGATGAGTTCCCAAACCTGAAGGC
TTTCATGTGCCGTTTTGAGGCTTTGGAGAAAATCGCTGCCTACTTGCAGTCTGATCAGTTCTTCAAGATGCCCATCAACA
ACAAGATGGCCCAGTGGGGCAACAAGCCTGTATGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .50 RPM
SRP007412_cerebellum 7 .21 RPM
SRP007412_heart 1 .78 RPM
SRP007412_kidney 87 .74 RPM
SRP007412_liver 0 .69 RPM
SRP007412_testis 1080 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005380 ortholog_one2one 2 retrogenes
retro_chof_1850, retro_chof_1989,
Callithrix jacchus ENSCJAG00000003168 ortholog_one2many 1 retrogene
retro_cjac_4,
Erinaceus europaeus ENSEEUG00000014211 ortholog_one2one 1 retrogene
retro_eeur_112,
Echinops telfairi ENSETEG00000005817 ortholog_one2many 2 retrogenes
retro_etel_1074, retro_etel_1910,
Homo sapiens ENSG00000134202 ortholog_one2one 1 retrogene
retro_hsap_2419,
Microcebus murinus ENSMICG00000005185 ortholog_one2one 1 retrogene
retro_mmur_1571,
Macaca mulatta ENSMMUG00000008029 ortholog_one2one 2 retrogenes
retro_mmul_610, retro_mmul_941,
Monodelphis domestica ENSMODG00000001899 ortholog_one2many 1 retrogene
retro_mdom_331,
Mus musculus ENSMUSG00000004032 ortholog_one2one 2 retrogenes
retro_mmus_491, retro_mmus_547,
Nomascus leucogenys ENSNLEG00000003302 ortholog_one2one 1 retrogene
retro_nleu_1895,
Pan troglodytes ENSPTRG00000001061 within_species_paralog 2 retrogenes
retro_ptro_1859, retro_ptro_2468,
Rattus norvegicus ENSRNOG00000047034 ortholog_one2many 1 retrogene
retro_rnor_963,
Sus scrofa ENSSSCG00000006821 ortholog_one2one 2 retrogenes
retro_sscr_10, retro_sscr_855,
Tarsius syrichta ENSTSYG00000006736 ortholog_one2one 1 retrogene
retro_tsyr_145,
Tursiops truncatus ENSTTRG00000009682 ortholog_one2one 1 retrogene
retro_ttru_1828,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1393 55.07 59.56
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2. retro_ptro_1709 71.32 57.33
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Download FASTA sequences of all ENSPTRG00000001063 retrocopies