Parental gene:

NUDT5, ENSPTRG00000002294

Aliases:None
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:HGNC Symbol;Acc:8052]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:12332688..12361180(-)


>ENSPTRG00000002294
ATGGAGAGCCAAGAACCAACGGAATCTTCTCAGAATGGCAAACAGTATATCATTTCAGAGGAGTTAATTTCAGAAGGAAA
ATGGGTCAAGCTTGAAAAAACAACGTACATGGATCCTACTGGTAAAACTAGAACTTGGGAATCAGTGAAACGTACAACCA
GGAAAGAGCAGACTGCGGATGGTGTCGCGGTCATCCCTGTGCTGCAGAGAACACTTCACTATGAGTGTATCGTTCTGGTG
AAACAGTTCCGACCACCAATGGGGGGCTACTGCATAGAGTTCCCTGCAGGTCTCATAGATGATGGTGAAACCCCAGAAGC
AGCTGCTCTCCGGGAGCTTGAAGAAGAAACTGGCTACAAAGGGGACGTTGCCGAATGTTCTCCAGCGGTCTGTATGGACC
CAGGCTTGTCAAACTGTACTATACACATTGTGACAGTCACCATTAACGGAGATGATGCCGAAAACGCAAGGCCGAAGCCA
AAGCCAGGTATTTTAGAGTTTGTGGAAGTCATTTCTTTACCCAAGAATGACCTGCTGCAGAGACTCGATGCTCTGGTAGC
TGAAGAACATCTCACAGTGGACGCCAGGGTCTATTCCTACGCTCTAGCGCTGAAACATGCAAATGCAAAGCCATTTGAAG
TGCCCTTCTTGAAATTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .35 RPM
SRP007412_cerebellum 6 .92 RPM
SRP007412_heart 2 .62 RPM
SRP007412_kidney 21 .31 RPM
SRP007412_liver 21 .38 RPM
SRP007412_testis 4 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019509 ortholog_one2one 2 retrogenes
retro_btau_1326, retro_btau_1438,
Canis familiaris ENSCAFG00000004794 ortholog_one2one 2 retrogenes
retro_cfam_435, retro_cfam_612,
Equus caballus ENSECAG00000023658 ortholog_one2one 1 retrogene
retro_ecab_647,
Echinops telfairi ENSETEG00000006403 ortholog_one2many 1 retrogene
retro_etel_946,
Felis catus ENSFCAG00000025093 ortholog_one2one 1 retrogene
retro_fcat_350,
Homo sapiens ENSG00000165609 ortholog_one2one 1 retrogene
retro_hsap_3580,
Gorilla gorilla ENSGGOG00000006325 ortholog_one2one 1 retrogene
retro_ggor_2415,
Loxodonta africana ENSLAFG00000012052 ortholog_one2one 1 retrogene
retro_lafr_226,
Myotis lucifugus ENSMLUG00000010453 ortholog_one2one 2 retrogenes
retro_mluc_1263, retro_mluc_2073,
Macaca mulatta ENSMMUG00000017141 ortholog_one2one 1 retrogene
retro_mmul_1828,
Nomascus leucogenys ENSNLEG00000012298 ortholog_one2one 1 retrogene
retro_nleu_2838,
Oryctolagus cuniculus ENSOCUG00000009308 ortholog_one2one 1 retrogene
retro_ocun_862,
Otolemur garnettii ENSOGAG00000005816 ortholog_one2one 2 retrogenes
retro_ogar_2071, retro_ogar_2988,
Pongo abelii ENSPPYG00000002091 ortholog_one2one 2 retrogenes
retro_pabe_2949, retro_pabe_3040,
Rattus norvegicus ENSRNOG00000017741 ortholog_one2many 1 retrogene
retro_rnor_1672,
Sus scrofa ENSSSCG00000011113 ortholog_one2many 1 retrogene
retro_sscr_143,
Tursiops truncatus ENSTTRG00000007394 ortholog_one2one 2 retrogenes
retro_ttru_209, retro_ttru_495,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2427 86.89 55.71
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000002294 retrocopies