Parental gene:

RHOJ, ENSPTRG00000006424

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:62267969..62356763(+)


>ENSPTRG00000006424
ATGAACTGCAAAGAGGGAACTGACAGCAGCTGCGGCTGCAGGGGCAACGACGAGAAGAAGATGTTGAAGTGTGTGGTGGT
GGGGGACGGTGCCGTGGGGAAAACCTGCCTGCTGATGAGCTACGCCAACGACGCCTTCCCAGAGGAATACGTGCCCACTG
TGTTTGACCACTATGCAGTTACTGTGACTGTGGGAGGCAAGCAACACTTGCTCGGACTGTATGACACCGCGGGACAGGAG
GACTACAACCAGCTGAGGCCGCTCTCCTACCCCAACACGGATGTGTTTTTGATCTGCTTCTCTGTCGTAAACCCTGCCTC
TTACCACAATGTCCAGGAGGAATGGGTCCCCGAGCTCAAGGACTGCATGCCTCACGTGCCTTATGTCCTCATAGGGACCC
AGATTGATCTCCGTGATGACCCAAAAACCTTGGCCCGTTTGCTGTATATGAAAGAGAAACCTCTCACTTACGAGCATGGT
GTGAAGCTCGCAAAAGCGATCGGAGCACAGTGCTACTTGGAATGTTCAGCTCTGACTCAGAAAGGTCTCAAAGCGGTTTT
TGATGAAGCAATCCTCACCATTTTCCACCCCAAGAAAAAGAAGAAACGCTGTTCTGAGGGTCACAGCTGCTGTTCAATTA
TCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .47 RPM
SRP007412_cerebellum 3 .73 RPM
SRP007412_heart 9 .65 RPM
SRP007412_kidney 6 .01 RPM
SRP007412_liver 4 .78 RPM
SRP007412_testis 2 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001761 ortholog_one2one 2 retrogenes
retro_dnov_192, retro_dnov_927,
Gorilla gorilla ENSGGOG00000007948 ortholog_one2one 1 retrogene
retro_ggor_22,
Pan troglodytes ENSPTRG00000018910 other_paralog 4 retrogenes
retro_ptro_1288, retro_ptro_3044, retro_ptro_3274, retro_ptro_36,
Vicugna pacos ENSVPAG00000004859 ortholog_one2one 2 retrogenes
retro_vpac_574, retro_vpac_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_910 81.56 83.64
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2. retro_ptro_1643 78.87 65.89
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3. retro_ptro_2091 75.00 71.03
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4. retro_ptro_2971 76.32 88.79
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Download FASTA sequences of all ENSPTRG00000006424 retrocopies