Parental gene:

SUPT4H1, ENSPTRG00000009451

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:57043838..57050849(-)


>ENSPTRG00000009451
ATGGCCCTGGAGACGGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCGCTGGTCAAGACTATAGACCA
GTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGAGAGATGGTATATGACTGCACTA
GCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCTATAAAGACCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 53 .93 RPM
SRP007412_cerebellum 70 .62 RPM
SRP007412_heart 35 .06 RPM
SRP007412_kidney 59 .97 RPM
SRP007412_liver 46 .48 RPM
SRP007412_testis 66 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017524 ortholog_one2one 2 retrogenes
retro_cfam_1399, retro_cfam_553,
Homo sapiens ENSG00000213246 ortholog_one2one 2 retrogenes
retro_hsap_1081, retro_hsap_2280,
Gorilla gorilla ENSGGOG00000007232 ortholog_one2one 2 retrogenes
retro_ggor_1693, retro_ggor_854,
Macropus eugenii ENSMEUG00000010164 ortholog_one2one 1 retrogene
retro_meug_2079,
Myotis lucifugus ENSMLUG00000025583 possible_ortholog 1 retrogene
retro_mluc_761,
Macaca mulatta ENSMMUG00000007579 ortholog_one2one 2 retrogenes
retro_mmul_1005, retro_mmul_842,
Mus musculus ENSMUSG00000020485 ortholog_one2one 2 retrogenes
retro_mmus_2857, retro_mmus_633,
Nomascus leucogenys ENSNLEG00000008159 ortholog_one2one 3 retrogenes
retro_nleu_1619, retro_nleu_1962, retro_nleu_2714,
Oryctolagus cuniculus ENSOCUG00000025823 ortholog_one2one 2 retrogenes
retro_ocun_1613, retro_ocun_1636,
Pongo abelii ENSPPYG00000008233 ortholog_one2one 1 retrogene
retro_pabe_1940,
Pteropus vampyrus ENSPVAG00000002320 ortholog_one2one 1 retrogene
retro_pvam_477,
Rattus norvegicus ENSRNOG00000007845 ortholog_one2one 3 retrogenes
retro_rnor_1255, retro_rnor_1973, retro_rnor_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_735 86.17 80.34
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2. retro_ptro_1614 89.71 58.12
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Download FASTA sequences of all ENSPTRG00000009451 retrocopies