Parental gene:

RAB1A, ENSPTRG00000011989

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:65978541..66022219(-)


>ENSPTRG00000011989
ATGTCCAGCATGAATCCCGAATATGATTATTTATTCAAGTTACTTCTGATTGGCGACTCAGGGGTTGGAAAGTCTTGCCT
TCTTCTTAGGTTTGCAGATGATACATATACAGAAAGCTACATCAGCACAATTGGTGTGGATTTCAAAATAAGAACTATAG
AGTTAGACGGGAAAACAATCAAGCTTCAAATATGGGACACAGCAGGCCAGGAAAGATTTCGAACAATCACCTCCAGTTAT
TACAGAGGAGCCCATGGCATCATAGTTGTGTATGATGTGACAGATCAGGAGTCCTTCAATAATGTTAAACAGTGGCTGCA
GGAAATAGATCGTTATGCCAGTGAAAATGTCAACAAATTGTTGGTAGGGAACAAATGTGATCTGACCACAAAGAAAGTAG
TAGACTACACAACAGCGAAGGAATTTGCTGATTCCCTTGGAATTCCGTTTTTGGAAACCAGTGCTAAGAATGCAACGAAT
GTAGAACAGTCTTTCATGACGATGGCAGCTGAGATTAAAAAGCGAATGGGTCCCGGAGCAACAGCTGGTGGTGCTGAGAA
GTCCAATGTTAAAATTCAGAGCACTCCAGTCAAGCAGTCAGGTGGAGGTTGCTGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 91 .25 RPM
SRP007412_cerebellum 94 .03 RPM
SRP007412_heart 78 .72 RPM
SRP007412_kidney 137 .51 RPM
SRP007412_liver 133 .52 RPM
SRP007412_testis 142 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000002205 ortholog_one2one 2 retrogenes
retro_etel_1687, retro_etel_413,
Homo sapiens ENSG00000138069 ortholog_one2one 2 retrogenes
retro_hsap_2362, retro_hsap_3626,
Macaca mulatta ENSMMUG00000021721 ortholog_one2one 1 retrogene
retro_mmul_951,
Oryctolagus cuniculus ENSOCUG00000017003 ortholog_one2one 1 retrogene
retro_ocun_800,
Pongo abelii ENSPPYG00000012360 ortholog_one2one 1 retrogene
retro_pabe_2135,
Pan troglodytes ENSPTRG00000001370 other_paralog 1 retrogene
retro_ptro_681,
Pan troglodytes ENSPTRG00000003915 within_species_paralog 1 retrogene
retro_ptro_2892,
Rattus norvegicus ENSRNOG00000004992 ortholog_one2one 1 retrogene
retro_rnor_110,
Ictidomys tridecemlineatus ENSSTOG00000020693 ortholog_one2one 1 retrogene
retro_itri_1541,
Drosophila melanogaster FBgn0016700 ortholog_one2many 1 retrogene
retro_dmel_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1727 88.20 77.56
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Download FASTA sequences of all ENSPTRG00000011989 retrocopies