Parental gene:

PARL, ENSPTRG00000015673

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:187857836..187914983(-)


>ENSPTRG00000015673
ATGGCGTGGCGAGGCTGGGCGCAGAGAGGCTGGGGCTGCGGCCAGGCGTGGGGTGCGTCGGTGGGCGGCCGCAGCTGCGA
GGAGCTCACTGCGGTCCTAACCCCGCCGCAGCTCCTCGGACGCAGGTTTAACTTCTTTATTCAACAAAAATGCGGATTCA
GAAAAGCACCCAGGAAGGTTGAACCTCGAAGATCAGACACAGGGACAAGTGGTGAAGCATATAAGAGAAGTGCTTTGATT
CCTCCTGTGGAAGAAACAGTCTTTTATCCTTCTCCCTATCCTATAAGGAGTCTCATAAAACCTTTATTTTTTACTGTTGG
GTTTACAGGCTGTGCATTTGGATCAGCTGCTATTTGGCAATATGAATCACTGAAATCCAGGGTCCAGAGTTATTTTGATG
GTATAAAAGCTGATTGGTTGGATAGCATAAGACCACAAAAAGAAGGAGACTTCAGAAAGGAGATTAACAAGTGGTGGAAT
AACCTAAGTGATGGCCAGCGGACTGTGACAGGTATTATAGCTGCAAATGTCCTTGTATTCTGTTTATGGAGAGTACCTTC
TCTGCAGCGGACAATGATCAGATATTTCACATCGAATCCAGCCTCAAAGGTCCTTTGTTCTCCAATGTTGCTGTCAACAT
TCAGTCATTTCTCCTTATTTCACATGGCAGCAAATATGTATGTTTTGTGGAGCTTCTCTTCCAGCATAGTGAACATTCTG
GGTCAAGAGCAGTTCATGGCAGTGTACCTATCTGCAGGTGTTATTTCCAATTTTGTCAGTTACGTGGGTAAAGTTGCCAC
AGGAAGATATGGACCATCACTTGGTGCATCTGGTGCCATCATGACAGTCCTCGCAGCTGTCTGCACTAAGATCCCAGAAG
GGAGGCTTGCCATTATTTTCCTTCCGATGTTCACGTTCACAGCAGGGAATGCCCTGAAAGCCATTATCGCCATGGATACA
GCAGGAATGATCCTGGGATGGAAATTTTTTGATCATGCGGCACATCTTGGGGGAGCTCTTTTTGGAATATGGTATGTTAC
TTACGGTCATGAACTGATTTGGAAGAACAGGGAGCCGCTAGTGAAAATCTGGCATGAAATAAGGACTAATGGCCCCAAAA
AAGGAGGTGGCTCTAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .99 RPM
SRP007412_cerebellum 32 .37 RPM
SRP007412_heart 30 .31 RPM
SRP007412_kidney 43 .83 RPM
SRP007412_liver 37 .68 RPM
SRP007412_testis 32 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021241 ortholog_one2one 2 retrogenes
retro_cjac_1415, retro_cjac_2384,
Dipodomys ordii ENSDORG00000014935 ortholog_one2one 1 retrogene
retro_dord_315,
Homo sapiens ENSG00000175193 ortholog_one2one 1 retrogene
retro_hsap_3526,
Gorilla gorilla ENSGGOG00000000416 ortholog_one2one 1 retrogene
retro_ggor_2384,
Mus musculus ENSMUSG00000033918 ortholog_one2one 2 retrogenes
retro_mmus_1882, retro_mmus_3526,
Nomascus leucogenys ENSNLEG00000006072 ortholog_one2one 1 retrogene
retro_nleu_491,
Otolemur garnettii ENSOGAG00000006126 ortholog_one2one 1 retrogene
retro_ogar_648,
Ictidomys tridecemlineatus ENSSTOG00000023222 ortholog_one2many 1 retrogene
retro_itri_380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2394 85.85 55.41
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Download FASTA sequences of all ENSPTRG00000015673 retrocopies