Parental gene: | PRIM1, ENSPVAG00000008017 |
| Aliases: | None |
| Description: | primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | scaffold_12223:20294..36961(-) |
>ENSPVAG00000008017
ATGGAGGCGTTTGACCCCGCGGAGCTGCCGGAGCTGCTTAAGCTTTATTACCGAAGGCTCTTTCCCTACGCCCAGTACTA
TCGCTGGCTTAACTATGGCGGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACATTGAAAGATGATATTT
ACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATA
GGCGCGGTATATTCTCACAGACCCAATCAACATAATACAGTGAAGCTGGGAGCTTTTCAGGCTCAGGAAAAAGAACTGGT
GTTTGACATTGACATGACAGACTATGATGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTTCTAAGTGCTGGACCC
TGATGACGATGGCCATACGTATCATCGACCGAGCATTGAAGGAGGACTTTGGATTTAAGCATCGCCTCTGGGTATATTCT
GGAAGAAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCCTCTGCTGTACGTTCTGGGATAGTTGA
GTATTTGAGTCTTGTAAAGGGTGGTCCAGATGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTGTCAGAA
AATCTATAAACATAATAAATAAATACTTTGAAGAATACGCGTTAGTTGATCAAGATATCTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTCATGATGAACTTCAACAAAGCTTCCAAAATCATCACAGTTCACTTCA
GCGTTGGGAGCATTTGAAGAAAGTAGCCAGATGTCTGAGTAACATCAAAAGTGATAAATATGGACCCTGGCTTGAGTGGG
AGATCATGCTCCAGTACTGTTTTCCACGGCTGGATATTAATGTTAGCAAAGGAATCAATCACTTGTTGAAGAGCCCTTTT
AGTGTTCATCCTAAAACAGGTCGAATTTCTGTGCCTATCGATTTACAGAAAGTGGATCAGTTTGATCCATTTACTGTTCC
AACCATAAGCTCCATCTGCCATGAATTAGATGCCATTTCCACAATTGAAGAGGAGAAAGGGGAGAACAAAGCTGAGTCTA
TTATCAAACATAGAACCAGAGATTATAAGAAGACCAGTCTAGCTCCTTATGTAAAAGTTTTTGAACAGTTTCTTGAAAAT
CTGGATAAATCCCGAAAAGGAGAACTTCTCAGGAAGAGTGTTTCAATGAGATGTTTT
ATGGAGGCGTTTGACCCCGCGGAGCTGCCGGAGCTGCTTAAGCTTTATTACCGAAGGCTCTTTCCCTACGCCCAGTACTA
TCGCTGGCTTAACTATGGCGGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACATTGAAAGATGATATTT
ACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATA
GGCGCGGTATATTCTCACAGACCCAATCAACATAATACAGTGAAGCTGGGAGCTTTTCAGGCTCAGGAAAAAGAACTGGT
GTTTGACATTGACATGACAGACTATGATGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTTCTAAGTGCTGGACCC
TGATGACGATGGCCATACGTATCATCGACCGAGCATTGAAGGAGGACTTTGGATTTAAGCATCGCCTCTGGGTATATTCT
GGAAGAAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCCTCTGCTGTACGTTCTGGGATAGTTGA
GTATTTGAGTCTTGTAAAGGGTGGTCCAGATGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTGTCAGAA
AATCTATAAACATAATAAATAAATACTTTGAAGAATACGCGTTAGTTGATCAAGATATCTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTCATGATGAACTTCAACAAAGCTTCCAAAATCATCACAGTTCACTTCA
GCGTTGGGAGCATTTGAAGAAAGTAGCCAGATGTCTGAGTAACATCAAAAGTGATAAATATGGACCCTGGCTTGAGTGGG
AGATCATGCTCCAGTACTGTTTTCCACGGCTGGATATTAATGTTAGCAAAGGAATCAATCACTTGTTGAAGAGCCCTTTT
AGTGTTCATCCTAAAACAGGTCGAATTTCTGTGCCTATCGATTTACAGAAAGTGGATCAGTTTGATCCATTTACTGTTCC
AACCATAAGCTCCATCTGCCATGAATTAGATGCCATTTCCACAATTGAAGAGGAGAAAGGGGAGAACAAAGCTGAGTCTA
TTATCAAACATAGAACCAGAGATTATAAGAAGACCAGTCTAGCTCCTTATGTAAAAGTTTTTGAACAGTTTCTTGAAAAT
CTGGATAAATCCCGAAAAGGAGAACTTCTCAGGAAGAGTGTTTCAATGAGATGTTTT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000015297 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000198056 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001603 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017443 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003458 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000007103 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004672 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022987 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000000408 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012998 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002153 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_153 | 62.90 | 57.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_703 | 72.52 | 93.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000008017 retrocopies