Parental gene:

RPL7, ENSPVAG00000009292

Aliases:None
Description:ribosomal protein L7 [Source:HGNC Symbol;Acc:10363]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_5801:30027..39414(-)


>ENSPVAG00000009292
TGCCAGGCGGGGAGAACAAATAGATGCGACAACGCTCATAATGCCAGAGAGAAGAAGAAGGTTCCTGCCGTGCCCGAAAC
CCTTAAGAAAAAGCGAAGGAATTTCGCAGAGCTGAAGATAAAGCGCCTGAGAAAGAAGTTTGCCCAAAAGATGCTTCGAA
AGGCAAGAAGGCTTATCTATGAAAAAGCTAAGCACTATCACAAAGAATATAGGCAGATGTACAGAACTGAGATTCGGATG
GCTAGGATGGCAAGAAAAGCTGGTAACTTCTATGTTCCTGCAGAACCCAAATTGGCATTTGTCATCAGGATCAGAGGCAT
CAACGGTGTGAGCCCCAAGGTCCGAAAGGTGCTGCAGCTTCTGCGCCTTCGCCAGATCTTTAACGGCACCTTTGTGAAGC
TCAACAAGGCTTCCATTAATATGCTGAGGATCGTGGAGCCGTACATCGCCTGGGGATACCCAAACCTGAAGTCAGTCAAT
GAATTGATCTACAAGCGTGGTTATGGCAAAATCAATAAAAAGCGAATTGCCCTGACGGATAACACATTGATTGCTCGTTC
TCTGGGTAAATATGGCATCATTTGCATGGAGGATCTGATTCATGAGATCTACACTGTTGGAAAACGCTTCAAAGAAGCAA
ACAACTTCCTATGGCCCTTCAAGTTGTCCTCTCCACGAGGTGGGATGAAGAAGAAGACCACCCATTTTGTAGAAGGCGGA
GACGCTGGCAACAGGGAAGACCAGATCAACAGGCTTATTAGACGGATGAACTAA

Species Parental gene accession Homology type Retrogenes number
Latimeria chalumnae ENSLACG00000003571 ortholog_one2one 1 retrogene
retro_lcha_63,
Loxodonta africana ENSLAFG00000017110 ortholog_one2many 10 retrogenes
retro_lafr_140, retro_lafr_169, retro_lafr_334, retro_lafr_462, retro_lafr_47, retro_lafr_524, retro_lafr_694, retro_lafr_707, retro_lafr_816, retro_lafr_909,
Macropus eugenii ENSMEUG00000016319 ortholog_one2many 9 retrogenes
retro_meug_1002, retro_meug_1449, retro_meug_1942, retro_meug_1947, retro_meug_60, retro_meug_760, retro_meug_84, retro_meug_968, retro_meug_99,
Monodelphis domestica ENSMODG00000007136 ortholog_one2many 4 retrogenes
retro_mdom_1341, retro_mdom_1998, retro_mdom_371, retro_mdom_66,
Oryctolagus cuniculus ENSOCUG00000008407 ortholog_one2many 12 retrogenes
retro_ocun_109, retro_ocun_1164, retro_ocun_1282, retro_ocun_1342, retro_ocun_1494, retro_ocun_1646, retro_ocun_1879, retro_ocun_456, retro_ocun_501, retro_ocun_718, retro_ocun_727, retro_ocun_785,
Pteropus vampyrus ENSPVAG00000008696 within_species_paralog 3 retrogenes
retro_pvam_1179, retro_pvam_1482, retro_pvam_975,
Sus scrofa ENSSSCG00000006182 possible_ortholog 3 retrogenes
retro_sscr_1138, retro_sscr_209, retro_sscr_796,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_68 82.16 93.00
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2. retro_pvam_69 89.36 90.66
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3. retro_pvam_105 69.91 81.32
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4. retro_pvam_109 76.73 93.00
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5. retro_pvam_151 78.11 64.20
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6. retro_pvam_287 80.00 92.61
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7. retro_pvam_308 82.79 93.77
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8. retro_pvam_995 83.61 93.77
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9. retro_pvam_1192 60.51 58.37
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10. retro_pvam_1221 80.42 92.61
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Download FASTA sequences of all ENSPVAG00000009292 retrocopies