Parental gene: | NAP1L1, ENSPVAG00000016032 |
| Aliases: | None |
| Description: | nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_1806:67620..87601(-) |
>ENSPVAG00000016032
ATGGCAGACATTGACAACAAAGAACAGTCTGAACTTGATCAAGATTTGGATGATGTTGAAGAAGTAGAAGAAGAAGAAAC
TGGTGAAGAAACAAAAATCAAAGCGCGTCAGCTGACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCTCTCCAAG
AAAGACTTGATGGTCTGGTAGAAACACCAACAGGATACATTGAAAGCCTGCCTAAGGTAGTTAAAAGACGAGTGAATGCT
CTCAAAAACCTTCAAGTTAAATGTGCACAGATAGAAGCCAAGTTCTATGAGGAAGTTCATGATCTTGAAAGAAAGTATGC
TGTTCTCTATCAGCCTTTATTTGATAAGCGATTCGAGATCATTAATGCAATTTATGAACCCACAGAAGAAGAATGTGAAT
GGAAACCAGATGAGGAAGATGAAATTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
ACACGATGAACCTATTCTGAAGCACTTGAAAGATATTAAAGTGAAGTTTTCAGATGCTGGTCAGCCTATGAGCTTTGTCT
TGGAATTTCACTTTGAACCCAACGAATATTTCACAAATGAAGTGTTGACAAAGACCTATAGGATGAGGTCAGAACCAGAT
GATTCTGATCCCTTTTCTTTTGATGGACCAGAAATTATGGGTTGTACAGGGTGCCAGATAGATTGGAAAAAGGGGAAGAA
TGTCACTTTGAAAACCATTAAAAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACCAAAACAGTTTCCA
ATGACTCTTTCTTTAATTTTTTTGCCCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGATGATGCTGAAGCTATCCTT
GCTGCAGACTTTGAAATTGGTCACTTTTTACGTGAACGTATAATCCCAAGATCAGTGTTATACTTTACTGGAGAAGCTAT
TGAAGATGATGATGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGATGAGGAAAATGATC
CAGACTATGACTCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA
ATGGCAGACATTGACAACAAAGAACAGTCTGAACTTGATCAAGATTTGGATGATGTTGAAGAAGTAGAAGAAGAAGAAAC
TGGTGAAGAAACAAAAATCAAAGCGCGTCAGCTGACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCTCTCCAAG
AAAGACTTGATGGTCTGGTAGAAACACCAACAGGATACATTGAAAGCCTGCCTAAGGTAGTTAAAAGACGAGTGAATGCT
CTCAAAAACCTTCAAGTTAAATGTGCACAGATAGAAGCCAAGTTCTATGAGGAAGTTCATGATCTTGAAAGAAAGTATGC
TGTTCTCTATCAGCCTTTATTTGATAAGCGATTCGAGATCATTAATGCAATTTATGAACCCACAGAAGAAGAATGTGAAT
GGAAACCAGATGAGGAAGATGAAATTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
ACACGATGAACCTATTCTGAAGCACTTGAAAGATATTAAAGTGAAGTTTTCAGATGCTGGTCAGCCTATGAGCTTTGTCT
TGGAATTTCACTTTGAACCCAACGAATATTTCACAAATGAAGTGTTGACAAAGACCTATAGGATGAGGTCAGAACCAGAT
GATTCTGATCCCTTTTCTTTTGATGGACCAGAAATTATGGGTTGTACAGGGTGCCAGATAGATTGGAAAAAGGGGAAGAA
TGTCACTTTGAAAACCATTAAAAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACCAAAACAGTTTCCA
ATGACTCTTTCTTTAATTTTTTTGCCCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGATGATGCTGAAGCTATCCTT
GCTGCAGACTTTGAAATTGGTCACTTTTTACGTGAACGTATAATCCCAAGATCAGTGTTATACTTTACTGGAGAAGCTAT
TGAAGATGATGATGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGATGAGGAAAATGATC
CAGACTATGACTCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020908 | ortholog_one2one | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001115 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003883 | possible_ortholog | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013702 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000015583 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020456 | ortholog_one2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000017474 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000058799 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010319 | possible_ortholog | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000009190 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003890 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003046 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_306 | 73.66 | 52.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_1282 | 65.17 | 50.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000016032 retrocopies