Parental gene: | Stx8, ENSRNOG00000003849 |
| Aliases: | None |
| Description: | Syntaxin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9Z2Q7] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:54258229..54498841(+) |
>ENSRNOG00000003849
ATGGCCCCAGACCCCTGGTTCTCCACGTACGATTCTACTTGTCAGATTGCCCAAGAAATCGCTGAGAAGATTCAAGAACG
AAATCAGTGTGAAAGAAGAGGTGAGAAGACACCTAAGCTTACCCTGACAATCAGAACTTTGTTGAAGAATCTGAAGGTAA
AGATCGACCTCTTGAAGGACTTACTTCTAAGAGCTGTGTCGACGCGCCAGATAACACAACTGGAGGGGGATCGAAGACAG
AACCTTCTGGATGATCTTGTCACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTTCCGAGCCGGATTTGAT
CAGGTCCAGCCTGATGAGTGAAGAAGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTGAGGAGCCGGAGGAGACCAGAG
GCTTGGGTTTCGATGAGATCCGGCAACAGCAGCAGAAAATTATTCAAGAACAGGACGCAGGTCTTGATGCCCTTTCCTCT
ATCATAAGTCGCCAAAAGCAAATGGGCCAGGAGATTGGGAATGAACTGGACGAACAGAACGAGATCATCGATGACCTTGC
CAACCTGGTGGAGAACACAGATGAGAAGCTTCGCACTGAAGCCAGGCGAGTGACCCTGGTGGACAGAAAGTCAGCTTCCT
GTGGGATGATAATGGTGATCTTATTGCTGCTCGTGGCTATTGTGGTGGTTGCAGTGTGGCCAACCAACTGA
ATGGCCCCAGACCCCTGGTTCTCCACGTACGATTCTACTTGTCAGATTGCCCAAGAAATCGCTGAGAAGATTCAAGAACG
AAATCAGTGTGAAAGAAGAGGTGAGAAGACACCTAAGCTTACCCTGACAATCAGAACTTTGTTGAAGAATCTGAAGGTAA
AGATCGACCTCTTGAAGGACTTACTTCTAAGAGCTGTGTCGACGCGCCAGATAACACAACTGGAGGGGGATCGAAGACAG
AACCTTCTGGATGATCTTGTCACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTTCCGAGCCGGATTTGAT
CAGGTCCAGCCTGATGAGTGAAGAAGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTGAGGAGCCGGAGGAGACCAGAG
GCTTGGGTTTCGATGAGATCCGGCAACAGCAGCAGAAAATTATTCAAGAACAGGACGCAGGTCTTGATGCCCTTTCCTCT
ATCATAAGTCGCCAAAAGCAAATGGGCCAGGAGATTGGGAATGAACTGGACGAACAGAACGAGATCATCGATGACCTTGC
CAACCTGGTGGAGAACACAGATGAGAAGCTTCGCACTGAAGCCAGGCGAGTGACCCTGGTGGACAGAAAGTCAGCTTCCT
GTGGGATGATAATGGTGATCTTATTGCTGCTCGTGGCTATTGTGGTGGTTGCAGTGTGGCCAACCAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .32 RPM |
| SRP017611_kidney | 10 .68 RPM |
| SRP017611_brain | 16 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002045 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017413 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002114 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000008276 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008612 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007815 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000001001 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010795 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2422 | 91.56 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2500 | 92.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000003849 retrocopies