Parental gene:

Stx8, ENSRNOG00000003849

Aliases:None
Description:Syntaxin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9Z2Q7]
Organism:Rat (Rattus norvegicus)
Coordinates:10:54258229..54498841(+)


>ENSRNOG00000003849
ATGGCCCCAGACCCCTGGTTCTCCACGTACGATTCTACTTGTCAGATTGCCCAAGAAATCGCTGAGAAGATTCAAGAACG
AAATCAGTGTGAAAGAAGAGGTGAGAAGACACCTAAGCTTACCCTGACAATCAGAACTTTGTTGAAGAATCTGAAGGTAA
AGATCGACCTCTTGAAGGACTTACTTCTAAGAGCTGTGTCGACGCGCCAGATAACACAACTGGAGGGGGATCGAAGACAG
AACCTTCTGGATGATCTTGTCACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTTCCGAGCCGGATTTGAT
CAGGTCCAGCCTGATGAGTGAAGAAGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTGAGGAGCCGGAGGAGACCAGAG
GCTTGGGTTTCGATGAGATCCGGCAACAGCAGCAGAAAATTATTCAAGAACAGGACGCAGGTCTTGATGCCCTTTCCTCT
ATCATAAGTCGCCAAAAGCAAATGGGCCAGGAGATTGGGAATGAACTGGACGAACAGAACGAGATCATCGATGACCTTGC
CAACCTGGTGGAGAACACAGATGAGAAGCTTCGCACTGAAGCCAGGCGAGTGACCCTGGTGGACAGAAAGTCAGCTTCCT
GTGGGATGATAATGGTGATCTTATTGCTGCTCGTGGCTATTGTGGTGGTTGCAGTGTGGCCAACCAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 16 .25 RPM
SRP017611_kidney 10 .68 RPM
SRP017611_liver 6 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002045 ortholog_one2one 1 retrogene
retro_amel_911,
Canis familiaris ENSCAFG00000017413 ortholog_one2one 1 retrogene
retro_cfam_1959,
Cavia porcellus ENSCPOG00000002114 ortholog_one2one 1 retrogene
retro_cpor_1034,
Felis catus ENSFCAG00000008276 ortholog_one2one 1 retrogene
retro_fcat_634,
Myotis lucifugus ENSMLUG00000008612 ortholog_one2one 1 retrogene
retro_mluc_2329,
Mustela putorius furo ENSMPUG00000007815 ortholog_one2one 2 retrogenes
retro_mputfur_975, retro_mputfur_996,
Pteropus vampyrus ENSPVAG00000001001 ortholog_one2one 1 retrogene
retro_pvam_147,
Tarsius syrichta ENSTSYG00000010795 ortholog_one2one 1 retrogene
retro_tsyr_1906,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2422 91.56 100.00
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2. retro_rnor_2500 92.44 100.00
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Download FASTA sequences of all ENSRNOG00000003849 retrocopies