RetrogeneDB ID: | retro_mputfur_975 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896983.1:3269213..3269749(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | STX8 | ||
Ensembl ID: | ENSMPUG00000007815 | ||
Aliases: | None | ||
Description: | syntaxin 8 [Source:HGNC Symbol;Acc:11443] |
Percent Identity: | 91.11 % |
Parental protein coverage: | 87.75 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | SPAGSFSTYDSTCQIAQEIAEKIQQQNQYERNGENTIRLTVTIRTLLQNLKDKIALLKDLLLRAVSTHQI |
.P...FSTYDSTCQIAQEIAEKIQQQNQYERNGENTIRLTVTIRTLLQN.KDKI.LLKDLLLRAVSTHQI | |
Retrocopy | APDPWFSTYDSTCQIAQEIAEKIQQQNQYERNGENTIRLTVTIRTLLQNQKDKITLLKDLLLRAVSTHQI |
Parental | T-QLEGDRRQNLLDELVTRERLLVASFKNEGAEPDLIRSSLMTGGAKRGVPNPWLFEEPEETRGLGFDEL |
..QLEGD.RQNLLDELVT.ERLLVASFKNEGAEPDLIRSSLM.GGAK.G.PNPWLFEE.EETRGLG.DEL | |
Retrocopy | S<QLEGD*RQNLLDELVT*ERLLVASFKNEGAEPDLIRSSLMPGGAKQGIPNPWLFEELEETRGLGSDEL |
Parental | RQQQQKIIQEQDAGLDALSSIISRQKQMGKEIGNELDEQN |
.QQQQKIIQEQDAGLDALSSIISRQKQMGKEIGNELDEQN | |
Retrocopy | WQQQQKIIQEQDAGLDALSSIISRQKQMGKEIGNELDEQN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000002045 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000017413 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000002114 | 1 retrocopy | |
Felis catus | ENSFCAG00000008276 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000008612 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000007815 | 2 retrocopies |
retro_mputfur_975 , retro_mputfur_996,
|
Pteropus vampyrus | ENSPVAG00000001001 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000003849 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000010795 | 1 retrocopy |