Parental gene: | Papola, ENSRNOG00000004827 |
| Aliases: | None |
| Description: | poly(A) polymerase alpha [Source:RefSeq peptide;Acc:NP_001101526] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 6:138807509..138859620(+) |
>ENSRNOG00000004827
ATGCCGTTTCCAGTTACAACGCAGGGATCACAACAAACGCAGCCGCCACAGAGGCACTATGGCATTACCTCTCCTATCAG
CTTAGCAGCCCCCAAGGAGACCGACTGCCTACTCACACAGAAACTCATCGAGACGCTGAAGCCCTTTGGGGTTTTTGAAG
AAGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTGAAAGAATGGATACGAGAAATCAGT
GAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACATTTGGATCCTACAGACTAGGAGT
ACATACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGATTTTTTCACCTCATTCT
ATGATAAATTGAAATTACAAGAAGAAGTGAAAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTCTGT
TTTGATGGAATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGATTTGGACCTACGAGATGA
CAGTCTGCTTAAAAACCTAGATATAAGATGCATAAGAAGCCTTAATGGTTGCAGGGTAACCGATGAGATTTTACATCTAG
TACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACTGTGGGCCAAACGGCACAACATCTATTCCAATATA
TTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAAC
TCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCA
ATCTTAATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATAC
CCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTAT
CACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATT
ATATTGTACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTCTGGAATGGGTGGGCTTGGTGGAATCAAAAATTCGTATC
CTGGTTGGAAGTTTAGAGAAGAATGAGTTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCCCCCAAGGAAAG
TCCTGATAGGGAAGAATTTCGCACAATGTGGGTGATTGGTTTAGTGTTTAAAAAAACTGAAAACTCTGAGAATCTCAGTG
TGGACCTCACCTATGATATCCAGTCTTTCACAGACACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGTTGGAT
ATGAAGATCGCAGCAATGCATGTGAAGAGAAAGCAGCTCCACCAGCTGCTGCCAAGTCATGTGCTTCAGAAGAGGAAGAA
GCATTCAACAGAAGGAGTCAAGTTAGCAGCTCTGAATGACAGCAGCCTTGACTTGTCTATGGACAGTGATAACAGCATGT
CTGTGCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCT
CCAGCTGTGACCGCAGCATCTGTGACCAGCATTCAGGCTTCTGAGGTTTCTGTACCACAAGCAAATTCCAGTGAAAGCCC
AGGGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCCA
GAGTTGTCTCCTCAACACGACTGGTAAACCCGTCGCCTAGACCTTCAGGAAACGCAGCAACAAAAGTACCTAATCCTATA
GTAGGAGTCAAGAGAACGTCCTCACCCCATAAAGAAGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGAAACAAGTGA
AGATGCTAACTGTCTTGCTTTGAGTGGACATGATAAAACAGAGACAAAGGAACAAGTTGGCATGGAGACAAGTGCGGCTC
CGTCAGAAGCTGCTCCGGCCTCGGCGTCTCTGGTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCCGATATCCCTGCT
CTCCCTGCAAACCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGACTGAATCGGTAA
ATGCCGTTTCCAGTTACAACGCAGGGATCACAACAAACGCAGCCGCCACAGAGGCACTATGGCATTACCTCTCCTATCAG
CTTAGCAGCCCCCAAGGAGACCGACTGCCTACTCACACAGAAACTCATCGAGACGCTGAAGCCCTTTGGGGTTTTTGAAG
AAGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTGAAAGAATGGATACGAGAAATCAGT
GAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACATTTGGATCCTACAGACTAGGAGT
ACATACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGATTTTTTCACCTCATTCT
ATGATAAATTGAAATTACAAGAAGAAGTGAAAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTCTGT
TTTGATGGAATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGATTTGGACCTACGAGATGA
CAGTCTGCTTAAAAACCTAGATATAAGATGCATAAGAAGCCTTAATGGTTGCAGGGTAACCGATGAGATTTTACATCTAG
TACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACTGTGGGCCAAACGGCACAACATCTATTCCAATATA
TTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAAC
TCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCA
ATCTTAATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATAC
CCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTAT
CACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATT
ATATTGTACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTCTGGAATGGGTGGGCTTGGTGGAATCAAAAATTCGTATC
CTGGTTGGAAGTTTAGAGAAGAATGAGTTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCCCCCAAGGAAAG
TCCTGATAGGGAAGAATTTCGCACAATGTGGGTGATTGGTTTAGTGTTTAAAAAAACTGAAAACTCTGAGAATCTCAGTG
TGGACCTCACCTATGATATCCAGTCTTTCACAGACACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGTTGGAT
ATGAAGATCGCAGCAATGCATGTGAAGAGAAAGCAGCTCCACCAGCTGCTGCCAAGTCATGTGCTTCAGAAGAGGAAGAA
GCATTCAACAGAAGGAGTCAAGTTAGCAGCTCTGAATGACAGCAGCCTTGACTTGTCTATGGACAGTGATAACAGCATGT
CTGTGCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCT
CCAGCTGTGACCGCAGCATCTGTGACCAGCATTCAGGCTTCTGAGGTTTCTGTACCACAAGCAAATTCCAGTGAAAGCCC
AGGGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCCA
GAGTTGTCTCCTCAACACGACTGGTAAACCCGTCGCCTAGACCTTCAGGAAACGCAGCAACAAAAGTACCTAATCCTATA
GTAGGAGTCAAGAGAACGTCCTCACCCCATAAAGAAGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGAAACAAGTGA
AGATGCTAACTGTCTTGCTTTGAGTGGACATGATAAAACAGAGACAAAGGAACAAGTTGGCATGGAGACAAGTGCGGCTC
CGTCAGAAGCTGCTCCGGCCTCGGCGTCTCTGGTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCCGATATCCCTGCT
CTCCCTGCAAACCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGACTGAATCGGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 81 .69 RPM |
| SRP017611_kidney | 142 .29 RPM |
| SRP017611_brain | 79 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000090060 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006287 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000000946 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010922 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012887 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000021111 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004611 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000004199 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_863 | 91.37 | 69.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000004827 retrocopies