Parental gene:

Psmc6, ENSRNOG00000007203

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:RefSeq peptide;Acc:NP_001093979]
Organism:Rat (Rattus norvegicus)
Coordinates:15:23631639..23653070(+)


>ENSRNOG00000007203
ATGGCCCTTCCCGGCATCCCCTATGAGCGACGGCTTCTCATCATGGCGGACCCTAGAGATAAGGCGCTTCAGGACTACCG
CAAGAAGCTGCTAGAACACAAGGAGATTGACGGCCGTCTTAAGGAGCTAAGGGAACAATTAAAAGAACTTACCAAGCAGT
ATGAAAAGTCTGAAAATGATCTGAAGGCACTACAAAGTGTTGGACAGATTGTAGGCGAAGTGCTTAAACAGTTAACAGAA
GAAAAGTTCATTGTTAAAGCAACAAACGGACCAAGATACGTCGTAGGCTGTCGTCGGCAGCTTGATAAAAGTAAGCTGAA
GCCAGGAACCAGAGTTGCTTTGGATATGACCACCCTAACCATCATGAGGTATCTGCCGAGAGAGGTGGATCCATTGGTTT
ATAACATGTCTCATGAGGATCCTGGAAATGTATCTTATTCTGAGATTGGAGGCCTGTCAGAACAGATTCGGGAATTAAGA
GAGGTAATAGAATTACCTCTTACAAATCCAGAATTATTCCAGCGTGTAGGAATAATACCTCCAAAAGGCTGTTTGCTCTA
TGGACCACCAGGCACTGGGAAAACACTCTTGGCACGAGCTGTCGCCAGCCAGCTGGACTGCAACTTCCTAAAGGTTGTGT
CAAGCTCTATTGTAGACAAGTACATTGGGGAAAGCGCTCGTTTGATTAGAGAAATGTTTAATTATGCCAGGGACCACCAG
CCATGCATCATTTTTATGGATGAAATAGATGCTATTGGTGGTCGTCGGTTTTCTGAGGGAACATCAGCTGACAGAGAGAT
TCAGAGAACTTTAATGGAGTTACTAAATCAAATGGATGGATTTGACACTCTTCATAGAGTTAAAATGATCATGGCTACAA
ACAGACCAGATACACTGGATCCTGCTTTGCTGCGCCCAGGAAGATTAGATAGAAAAATACATATTGATTTACCAAATGAA
CAAGCAAGATTAGATATATTGAAAATCCACGCTGGTCCTATTACAAAGCATGGTGAAATAGATTATGAAGCCATTGTAAA
GCTTTCAGATGGCTTTAATGGAGCAGACCTGAGAAATGTTTGTACTGAAGCAGGTATGTTTGCAATTCGTGCTGATCATG
ATTTTGTAGTTCAGGAAGACTTCATGAAAGCAGTCAGAAAAGTGGCTGACTCCAAGAAGCTAGAGTCCAAACTGGACTAT
AAACCTGTGTAA

Library Parental gene expression (RPM)
SRP017611_liver 41 .08 RPM
SRP017611_kidney 52 .06 RPM
SRP017611_brain 56 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007126 ortholog_one2many 2 retrogenes
retro_cjac_204, retro_cjac_3221,
Cavia porcellus ENSCPOG00000009477 ortholog_one2many 1 retrogene
retro_cpor_47,
Homo sapiens ENSG00000100519 ortholog_one2one 2 retrogenes
retro_hsap_1022, retro_hsap_4059,
Gorilla gorilla ENSGGOG00000002152 ortholog_one2one 2 retrogenes
retro_ggor_2727, retro_ggor_808,
Macropus eugenii ENSMEUG00000007084 ortholog_one2one 3 retrogenes
retro_meug_1700, retro_meug_2090, retro_meug_923,
Monodelphis domestica ENSMODG00000014500 ortholog_one2one 1 retrogene
retro_mdom_438,
Nomascus leucogenys ENSNLEG00000012518 ortholog_one2one 2 retrogenes
retro_nleu_559, retro_nleu_900,
Otolemur garnettii ENSOGAG00000010011 ortholog_one2one 1 retrogene
retro_ogar_3101,
Pongo abelii ENSPPYG00000005820 ortholog_one2one 2 retrogenes
retro_pabe_3334, retro_pabe_858,
Pan troglodytes ENSPTRG00000006352 ortholog_one2one 2 retrogenes
retro_ptro_2752, retro_ptro_699,
Tursiops truncatus ENSTTRG00000003880 ortholog_one2one 1 retrogene
retro_ttru_117,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1480 86.51 93.55
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Download FASTA sequences of all ENSRNOG00000007203 retrocopies