Parental gene:

Polr3g, ENSRNOG00000016260

Aliases:None
Description:DNA-directed RNA polymerase III subunit RPC7 [Source:RefSeq peptide;Acc:NP_001102938]
Organism:Rat (Rattus norvegicus)
Coordinates:2:9417664..9458293(-)


>ENSRNOG00000016260
ATGGCTGGCAATAAAGGAAGAGGCCGTGCTGCCTATACCTTTAATATCGAAGCTGTTGGATTCAGCAGAGGGGAGAAGTT
ACCTGATGTTGTGTTGAAGCCACCCCCGCTATTTCCTGATACAGATTACAAGCCAGTGCCCCTGAAAACAGGAGAAGACG
AGGATTACATGCTGGCCTTGAAACAGGAGTTGAGGGAAACAGTGAAACGATTGCCTTACTTTATCGAAACACCTGAAGAA
AAACAAGATGATATTGAAAGGTATAGCAAGCGATACATGAAGGTCTATAAAGAAGAATGGGAACCAGATTGGAGAAGACT
TCCAAGAGAGATGATGCCAAGGAAAAAGTGCAAAAAAGCGGATCCAAAATCCAAAGCAGCCAAAGCCACAAGCAAGGGTA
CTACCCTCATGAATTCCACAGATGTGTTGAAAAAGATCGAGGAACTGGAAAGGAGAGGCGAGGGTGAAAGGTCGGATGAA
GAAAACGACGAGAAAGAAGGGAGCAAAGAGAAAGAGAAAGATGAGGAGGAGGATGGCGAAGAAGATGCAGAACAGGAGGA
GTATGATGAAGAGGAACAAGAGGAGGAGAATGACTACATTAACTCCTACTTCGACAACGGGGATGATTTTGTGGTAGACA
GCGATGACAACATGGACGAAGCCACCTACTAG

Library Parental gene expression (RPM)
SRP017611_liver 8 .14 RPM
SRP017611_kidney 18 .21 RPM
SRP017611_brain 5 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006306 ortholog_one2one 1 retrogene
retro_chof_125,
Callithrix jacchus ENSCJAG00000010747 ortholog_one2one 1 retrogene
retro_cjac_2691,
Echinops telfairi ENSETEG00000008379 ortholog_one2one 1 retrogene
retro_etel_1040,
Homo sapiens ENSG00000113356 ortholog_one2one 2 retrogenes
retro_hsap_1454, retro_hsap_1885,
Gorilla gorilla ENSGGOG00000000266 ortholog_one2one 2 retrogenes
retro_ggor_1119, retro_ggor_1382,
Myotis lucifugus ENSMLUG00000014954 ortholog_one2one 1 retrogene
retro_mluc_2233,
Macaca mulatta ENSMMUG00000018972 ortholog_one2one 1 retrogene
retro_mmul_1332,
Nomascus leucogenys ENSNLEG00000013749 ortholog_one2one 1 retrogene
retro_nleu_1807,
Otolemur garnettii ENSOGAG00000005560 ortholog_one2one 1 retrogene
retro_ogar_3512,
Pongo abelii ENSPPYG00000015624 ortholog_one2one 1 retrogene
retro_pabe_1564,
Pan troglodytes ENSPTRG00000017068 ortholog_one2one 2 retrogenes
retro_ptro_1266, retro_ptro_989,
Ictidomys tridecemlineatus ENSSTOG00000008664 ortholog_one2many 1 retrogene
retro_itri_18,
Tupaia belangeri ENSTBEG00000002278 ortholog_one2one 2 retrogenes
retro_tbel_2495, retro_tbel_3069,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_458 78.36 74.44
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2. retro_rnor_503 91.52 100.00
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Download FASTA sequences of all ENSRNOG00000016260 retrocopies