Parental gene:

Psma5, ENSRNOG00000019868

Aliases:None
Description:proteasome subunit alpha type-5 [Source:RefSeq peptide;Acc:NP_058978]
Organism:Rat (Rattus norvegicus)
Coordinates:2:230519704..230543036(+)


>ENSRNOG00000019868
ATGTTCCTCACTCGGTCCGAGTACGACAGGGGTGTGAACACTTTTTCTCCTGAAGGAAGATTATTTCAAGTGGAATATGC
CATTGAGGCCATCAAGCTTGGTTCTACGGCCATTGGCATCCAGACATCAGAGGGTGTATGTCTAGCTGTGGAGAAGAGAA
TTACCTCGCCACTAATGGAGCCTAGCAGCATTGAGAAAATCGTAGAGATTGATGCTCATATAGGTTGTGCCATGAGTGGG
CTAATTGCTGATGCTAAAACTTTAATTGATAAAGCCAGAGTGGAGACACAGAACCACTGGTTCACCTATAATGAGACAAT
GACAGTTGAGAGTGTGACCCAGGCTGTGTCCAATCTGGCTTTGCAGTTCGGAGAAGAAGATGCAGATCCAGGTGCTATGT
CTCGTCCCTTTGGAGTAGCATTGTTGTTTGGAGGAGTTGATGAGAAAGGGCCCCAACTGTTTCACATGGACCCATCTGGG
ACCTTCGTACAGTGTGATGCTCGAGCAATTGGTTCTGCGTCAGAGGGTGCCCAGAGCTCCTTGCAGGAAGTTTACCACAA
GTCTATGACTCTGAAGGAGGCCATCAAGTCTTCACTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAACGCAACTA
ACATCGAGCTGGCCACAGTGCAGCCTGGTCAGAATTTCCACATGTTCACAAAGGAAGAACTGGAGGAGGTGATCAAGGAC
ATTTAA

Library Parental gene expression (RPM)
SRP017611_brain 36 .24 RPM
SRP017611_kidney 35 .31 RPM
SRP017611_liver 33 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000013670 ortholog_one2one 1 retrogene
retro_cpor_1063,
Equus caballus ENSECAG00000011835 ortholog_one2one 1 retrogene
retro_ecab_1106,
Echinops telfairi ENSETEG00000012916 ortholog_one2one 1 retrogene
retro_etel_1053,
Mus musculus ENSMUSG00000068749 ortholog_one2many 1 retrogene
retro_mmus_52,
Ochotona princeps ENSOPRG00000008863 ortholog_one2one 1 retrogene
retro_opri_449,
Sus scrofa ENSSSCG00000006830 ortholog_one2one 2 retrogenes
retro_sscr_1156, retro_sscr_1194,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_658 75.82 100.00
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2. retro_rnor_1230 73.15 60.58
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Download FASTA sequences of all ENSRNOG00000019868 retrocopies