Parental gene:

PTS, ENSSSCG00000015040

Aliases:None
Description:6-pyruvoyltetrahydropterin synthase [Source:HGNC Symbol;Acc:9689]
Organism:Pig (Sus scrofa)
Coordinates:9:44771847..44778992(+)


>ENSSSCG00000015040
ATGAGGAGCGACGCTGACTCAGGCCCCCACCGGCGGGCGCGAGTGTCCCGCCTCGCGTCCTTCAGCGCGTCCCATCGGCT
CCACAGCAAATCTCTCAGTAATGAAGAAAACTTGAAACTCTTTGGGAAATGCAACAATCCAAATGGCCATGGGCACAATT
ATAAAGTTGTGGTGACAGTACATGGAGAGATTGATCCTGTTACAGGAATGGTTATGAATTTGACTGATCTCAAAAAGTAT
ATGGAGGAGGCAATCATGAAGCCCCTTGATCATAAGAATCTGGATCTGGATGTGCCATACTTTGCAGATGTTGTAAGCAC
AACAGAAAATGTAGCTGTGTATATATGGGAAAACCTCCAGAAATACCTTCCTGCGGGAGTTCTTTATAAAGTAAAAGTAT
ATGAAACTGACAATAATATTGTAGTCTATAAAGGAGAA

Library Parental gene expression (RPM)
SRP014902_placenta 8 .23 RPM
SRP014902_testis 26 .31 RPM
SRP018288_heart 42 .59 RPM
SRP018288_kidney 60 .58 RPM
SRP018288_liver 23 .51 RPM
SRP018288_lung 14 .05 RPM
SRP018856_adipose 9 .33 RPM
SRP035408_brain 29 .79 RPM
SRP035408_liver 19 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003968 ortholog_one2one 3 retrogenes
retro_amel_1001, retro_amel_1480, retro_amel_691,
Bos taurus ENSBTAG00000003770 ortholog_one2one 3 retrogenes
retro_btau_1182, retro_btau_1762, retro_btau_682,
Canis familiaris ENSCAFG00000013915 ortholog_one2one 2 retrogenes
retro_cfam_1386, retro_cfam_1859,
Dasypus novemcinctus ENSDNOG00000014823 ortholog_one2one 1 retrogene
retro_dnov_1747,
Echinops telfairi ENSETEG00000008145 ortholog_one2many 2 retrogenes
retro_etel_1924, retro_etel_2039,
Felis catus ENSFCAG00000024702 ortholog_one2one 3 retrogenes
retro_fcat_1546, retro_fcat_212, retro_fcat_564,
Myotis lucifugus ENSMLUG00000023388 ortholog_one2one 1 retrogene
retro_mluc_946,
Macaca mulatta ENSMMUG00000015255 possible_ortholog 1 retrogene
retro_mmul_995,
Sorex araneus ENSSARG00000001975 ortholog_one2one 2 retrogenes
retro_sara_163, retro_sara_72,
Tursiops truncatus ENSTTRG00000010526 ortholog_one2one 1 retrogene
retro_ttru_1710,
Vicugna pacos ENSVPAG00000000061 ortholog_one2one 1 retrogene
retro_vpac_363,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_284 79.82 77.40
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Download FASTA sequences of all ENSSSCG00000015040 retrocopies