Parental gene:

ZCCHC17, ENSSTOG00000003825

Aliases:None
Description:zinc finger, CCHC domain containing 17 [Source:HGNC Symbol;Acc:30246]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393284.1:14535248..14575174(+)


>ENSSTOG00000003825
ATGGTGACAGATTATGGAGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCACATGTCCTC
TTGTCGGGTGGACAAGCCTTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAACTGATTGGTCGAGAGATGAAAA
ATGATAGGATAAAAGTATCCCTCTCCATGAAAGTTGTCAACCAAGGGACTGGGAAAGACCTCGATCCCAACAATGTTATC
ATTGAGCAAGAAGAGAGGCGAAGGCGGTCCTTCCAGGATTACACTGGGCAGAAGATCACTCTTGAGGCGGTCCTGAACAC
TACCTGCAAGAAGTGTGGCTGTAAAGGTCACTTTGCAAAAGATTGCTTCATGCAACCAGGTGGGACCAAATATTCTCTGA
TACCTGATGAAGAAGAGGAGAAAGAAGAGACAAAGTCAGCAGAATTTGAGAAACCTGATTCCATGAGGAATTCTTCCCGG
AAAAGAAAAAAGGAAAAGAAGAAAAAGAAACATAGAGACAAGAAGTCATCTGACTCCGACAGCTCAGACTCTGAGAGTGA
TACGGGCAAGAGAGCAAAGCACACATCAAAAGATAGCAAGGCGGCTAAGAAGAAGAAAAAGAAGAAGAAGCATAAGAAGA
AGCACAAGGAATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017710 ortholog_one2one 1 retrogene
retro_amel_1501,
Bos taurus ENSBTAG00000016818 ortholog_one2many 2 retrogenes
retro_btau_168, retro_btau_273,
Canis familiaris ENSCAFG00000011131 ortholog_one2many 2 retrogenes
retro_cfam_485, retro_cfam_835,
Callithrix jacchus ENSCJAG00000006259 ortholog_one2one 1 retrogene
retro_cjac_4218,
Dasypus novemcinctus ENSDNOG00000000509 ortholog_one2one 1 retrogene
retro_dnov_2548,
Loxodonta africana ENSLAFG00000015364 ortholog_one2one 1 retrogene
retro_lafr_534,
Myotis lucifugus ENSMLUG00000000594 ortholog_one2one 1 retrogene
retro_mluc_2176,
Monodelphis domestica ENSMODG00000017082 ortholog_one2many 1 retrogene
retro_mdom_252,
Mustela putorius furo ENSMPUG00000015442 ortholog_one2one 1 retrogene
retro_mputfur_680,
Otolemur garnettii ENSOGAG00000013749 ortholog_one2one 1 retrogene
retro_ogar_1225,
Sorex araneus ENSSARG00000007944 ortholog_one2one 1 retrogene
retro_sara_691,
Tursiops truncatus ENSTTRG00000014870 ortholog_one2one 2 retrogenes
retro_ttru_1383, retro_ttru_1613,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_405 74.19 70.51
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Download FASTA sequences of all ENSSTOG00000003825 retrocopies