Parental gene: | FAM20B, ENSSTOG00000005086 |
| Aliases: | None |
| Description: | family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393291.1:9880526..9915432(-) |
>ENSSTOG00000005086
ATGGCCACCAAGAAAATCATTAAAGCCGATGTAGGTTATAAAGGGACTCAGCTGAAAGCCTTACTGATACTTGAAGGAGG
ACAGAAAGTTGTCTTCAAACCTAAGCGGTATAGCCGAGACTATGTGGTGGAAGGGGAGCCATATGCTGGTTATGATAGAC
ACAACGCAGAGGTAGCAGCCTTTCATTTGGACAGGATTCTGGGTTTCCGCCGAGCCCCCTTGGTGGTTGGCAGGTTTGTT
AATCTACGGACAGAGATCAAGCCTGTTGCTACGGAGCAGCTGTTGAGCACCTTCCTAGCTGTAGGAAACAATACTTGTTT
CTATGGGAAGTGCTATTACTGCCGAGAAACAGAGCCAGCTTGTGCAGATGGAGACACAATGGAGGGATCTGTCACGCTTT
GGCTTCCAGATGTGTGGCCTCTGCAGAAACACCGACACCCCTGGGGCAGGACTTATCGAGAAGGCAAATTGGCCAGGTGG
GAGTATGATGAGAGCTACTGTGATGCTGTGAAGAAAACATCCCCATATGACTCAGGCCCACGCCTCTTGGACATCATTGA
CACCTCTGTCTTTGATTACCTGATTGGCAATGCTGACCGCCATCACTATGAGAGCTTTCAGGATGATGAAGGCGCTAGTA
TGCTCATCCTTCTTGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCATCCTTGCCCCTCTCTATCAG
TGCTGCATCATTAGGGTTTCTACCTGGAACAGACTGAACTACCTAAAGAATGGAGTGCTAAAGTCTGCCTTAAAATCTGC
CATGGCCCATGATCCCATCTCCCCCGTGCTCTCTGATCCTCACCTGGACGCTGTGGACCAGCGGCTCCTGAATGTCCTGG
CCACCGTGAAGCAGTGCACTGACCAGTTTGGGATGGACACTGTGCTGGTAGAAGACAGGATGCCTCTGTCCCACTTGTAA
ATGGCCACCAAGAAAATCATTAAAGCCGATGTAGGTTATAAAGGGACTCAGCTGAAAGCCTTACTGATACTTGAAGGAGG
ACAGAAAGTTGTCTTCAAACCTAAGCGGTATAGCCGAGACTATGTGGTGGAAGGGGAGCCATATGCTGGTTATGATAGAC
ACAACGCAGAGGTAGCAGCCTTTCATTTGGACAGGATTCTGGGTTTCCGCCGAGCCCCCTTGGTGGTTGGCAGGTTTGTT
AATCTACGGACAGAGATCAAGCCTGTTGCTACGGAGCAGCTGTTGAGCACCTTCCTAGCTGTAGGAAACAATACTTGTTT
CTATGGGAAGTGCTATTACTGCCGAGAAACAGAGCCAGCTTGTGCAGATGGAGACACAATGGAGGGATCTGTCACGCTTT
GGCTTCCAGATGTGTGGCCTCTGCAGAAACACCGACACCCCTGGGGCAGGACTTATCGAGAAGGCAAATTGGCCAGGTGG
GAGTATGATGAGAGCTACTGTGATGCTGTGAAGAAAACATCCCCATATGACTCAGGCCCACGCCTCTTGGACATCATTGA
CACCTCTGTCTTTGATTACCTGATTGGCAATGCTGACCGCCATCACTATGAGAGCTTTCAGGATGATGAAGGCGCTAGTA
TGCTCATCCTTCTTGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCATCCTTGCCCCTCTCTATCAG
TGCTGCATCATTAGGGTTTCTACCTGGAACAGACTGAACTACCTAAAGAATGGAGTGCTAAAGTCTGCCTTAAAATCTGC
CATGGCCCATGATCCCATCTCCCCCGTGCTCTCTGATCCTCACCTGGACGCTGTGGACCAGCGGCTCCTGAATGTCCTGG
CCACCGTGAAGCAGTGCACTGACCAGTTTGGGATGGACACTGTGCTGGTAGAAGACAGGATGCCTCTGTCCCACTTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005236 | ortholog_one2one | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006175 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000005651 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000116199 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002484 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006654 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006260 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015580 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012751 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000466 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000001725 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005482 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_441 | 71.71 | 78.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_539 | 84.54 | 60.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000005086 retrocopies