Parental gene: | HDAC1, ENSTTRG00000001613 |
| Aliases: | None |
| Description: | histone deacetylase 1 [Source:HGNC Symbol;Acc:4852] |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | GeneScaffold_940:11178..25984(+) |
>ENSTTRG00000001613
CGCCCTCACAAAGCCAATGCTGAGGAGATGACCAAGTACCACAGTGATGACTACATTAAATTCTTGCGCTCCATCCGCCC
AGATAACATGTCTGAGTACAGCAAGCAGATGCAGAGATTTAACGTTGGTGAGGACTGTCCGGTATTTGATGGCCTCTTTG
AGTTCTGTCAGCTATCTACTGGTGGCTCTGTGGCAAGTGCCGTGAAACTTAATAAGCAGCAGACGGACATCGCTGTGAAT
TGGGCTGGGGGCCTACACCATGCAAAGAAGTCCGAGGCATCTGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCT
GGAACTGCTAAAGTATCACCAGAGGGTGCTGTATATTGACATTGATATTCACCACGGCGATGGCGTGGAAGAGGCCTTCT
ATACCACAGACCGAGTCATGACTGTGTCCTTTCATAAATATGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATT
GGGGCTGGCAAAGGCAAGTATTACGCTGTTAACTACCCGCTCCGAGATGGGATTGATGACGAGTCCTATGAGGCCATTTT
CAAGCCGGTCATGTCCAAAGTAATGGAGATGTTCCAGCCCAGTGCAGTCGTCTTACAGTGTGGCTCTGACTCCTTGTCTG
GTGATCGGTTAGGTTGCTTCAATTTGACCATCAAAGGGCACGCCAAGTGTGTGGAATTTGTGAAGAGCTTCAACCTGCCT
ATGCTGATGCTGGGAGGAGGTGGCTACACCATTCGTAATGTCGCCCGGTGCTGGACATACGAAACAGCTGTGGCCCTGGA
CACAGAGATCCCTAATGAGCTTCCATACAACGACTACTTCGAATACTTTGGACCAGATTTCAAACTTCACATCAGTCCTT
CCAATATGACTAACCAGAACACTAATGAGTACCTGGAAAAGATCAAACAGCGACTGTTTGAGAACCTGAGAATGCTGCCC
CACGCGCCTGGGGTCCAAATGCAGGCCATTCCTGAGGATGCCATTCCAGAGGAGAGTGGCGATGAGGATGAAGAAGACCC
TGACAAGCGCATTTCAATCTGTTCCTCGGACAAACGAATTGCCTGTGAGGAAGAGTTCTCCGACTCTGACGAGGAGGGAG
AAGGCGGTCGCAAGAACTCTTCCAACTTCAAAAAAGCCAAGAGAGTCAAAACAGAAGATGAGAAAGAGAAAGACCCAGAA
GAGAAGAAAGAAGTCACAGAAGAGGAGAAAACCAAGGAGGAGAAGCAAGAAGCCAAAGGGGTCAAGGAGGAGGTCAAGTT
GGCCTGA
CGCCCTCACAAAGCCAATGCTGAGGAGATGACCAAGTACCACAGTGATGACTACATTAAATTCTTGCGCTCCATCCGCCC
AGATAACATGTCTGAGTACAGCAAGCAGATGCAGAGATTTAACGTTGGTGAGGACTGTCCGGTATTTGATGGCCTCTTTG
AGTTCTGTCAGCTATCTACTGGTGGCTCTGTGGCAAGTGCCGTGAAACTTAATAAGCAGCAGACGGACATCGCTGTGAAT
TGGGCTGGGGGCCTACACCATGCAAAGAAGTCCGAGGCATCTGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCT
GGAACTGCTAAAGTATCACCAGAGGGTGCTGTATATTGACATTGATATTCACCACGGCGATGGCGTGGAAGAGGCCTTCT
ATACCACAGACCGAGTCATGACTGTGTCCTTTCATAAATATGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATT
GGGGCTGGCAAAGGCAAGTATTACGCTGTTAACTACCCGCTCCGAGATGGGATTGATGACGAGTCCTATGAGGCCATTTT
CAAGCCGGTCATGTCCAAAGTAATGGAGATGTTCCAGCCCAGTGCAGTCGTCTTACAGTGTGGCTCTGACTCCTTGTCTG
GTGATCGGTTAGGTTGCTTCAATTTGACCATCAAAGGGCACGCCAAGTGTGTGGAATTTGTGAAGAGCTTCAACCTGCCT
ATGCTGATGCTGGGAGGAGGTGGCTACACCATTCGTAATGTCGCCCGGTGCTGGACATACGAAACAGCTGTGGCCCTGGA
CACAGAGATCCCTAATGAGCTTCCATACAACGACTACTTCGAATACTTTGGACCAGATTTCAAACTTCACATCAGTCCTT
CCAATATGACTAACCAGAACACTAATGAGTACCTGGAAAAGATCAAACAGCGACTGTTTGAGAACCTGAGAATGCTGCCC
CACGCGCCTGGGGTCCAAATGCAGGCCATTCCTGAGGATGCCATTCCAGAGGAGAGTGGCGATGAGGATGAAGAAGACCC
TGACAAGCGCATTTCAATCTGTTCCTCGGACAAACGAATTGCCTGTGAGGAAGAGTTCTCCGACTCTGACGAGGAGGGAG
AAGGCGGTCGCAAGAACTCTTCCAACTTCAAAAAAGCCAAGAGAGTCAAAACAGAAGATGAGAAAGAGAAAGACCCAGAA
GAGAAGAAAGAAGTCACAGAAGAGGAGAAAACCAAGGAGGAGAAGCAAGAAGCCAAAGGGGTCAAGGAGGAGGTCAAGTT
GGCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000002649 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013837 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009948 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028800 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005709 | ortholog_one2one | 3 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000004134 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008787 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015043 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_1236 | 87.73 | 75.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000001613 retrocopies