Parental gene:

HDAC1, ENSTTRG00000001613

Aliases:None
Description:histone deacetylase 1 [Source:HGNC Symbol;Acc:4852]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_940:11178..25984(+)


>ENSTTRG00000001613
CGCCCTCACAAAGCCAATGCTGAGGAGATGACCAAGTACCACAGTGATGACTACATTAAATTCTTGCGCTCCATCCGCCC
AGATAACATGTCTGAGTACAGCAAGCAGATGCAGAGATTTAACGTTGGTGAGGACTGTCCGGTATTTGATGGCCTCTTTG
AGTTCTGTCAGCTATCTACTGGTGGCTCTGTGGCAAGTGCCGTGAAACTTAATAAGCAGCAGACGGACATCGCTGTGAAT
TGGGCTGGGGGCCTACACCATGCAAAGAAGTCCGAGGCATCTGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCT
GGAACTGCTAAAGTATCACCAGAGGGTGCTGTATATTGACATTGATATTCACCACGGCGATGGCGTGGAAGAGGCCTTCT
ATACCACAGACCGAGTCATGACTGTGTCCTTTCATAAATATGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATT
GGGGCTGGCAAAGGCAAGTATTACGCTGTTAACTACCCGCTCCGAGATGGGATTGATGACGAGTCCTATGAGGCCATTTT
CAAGCCGGTCATGTCCAAAGTAATGGAGATGTTCCAGCCCAGTGCAGTCGTCTTACAGTGTGGCTCTGACTCCTTGTCTG
GTGATCGGTTAGGTTGCTTCAATTTGACCATCAAAGGGCACGCCAAGTGTGTGGAATTTGTGAAGAGCTTCAACCTGCCT
ATGCTGATGCTGGGAGGAGGTGGCTACACCATTCGTAATGTCGCCCGGTGCTGGACATACGAAACAGCTGTGGCCCTGGA
CACAGAGATCCCTAATGAGCTTCCATACAACGACTACTTCGAATACTTTGGACCAGATTTCAAACTTCACATCAGTCCTT
CCAATATGACTAACCAGAACACTAATGAGTACCTGGAAAAGATCAAACAGCGACTGTTTGAGAACCTGAGAATGCTGCCC
CACGCGCCTGGGGTCCAAATGCAGGCCATTCCTGAGGATGCCATTCCAGAGGAGAGTGGCGATGAGGATGAAGAAGACCC
TGACAAGCGCATTTCAATCTGTTCCTCGGACAAACGAATTGCCTGTGAGGAAGAGTTCTCCGACTCTGACGAGGAGGGAG
AAGGCGGTCGCAAGAACTCTTCCAACTTCAAAAAAGCCAAGAGAGTCAAAACAGAAGATGAGAAAGAGAAAGACCCAGAA
GAGAAGAAAGAAGTCACAGAAGAGGAGAAAACCAAGGAGGAGAAGCAAGAAGCCAAAGGGGTCAAGGAGGAGGTCAAGTT
GGCCTGA

Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000002649 ortholog_one2many 1 retrogene
retro_cint_18,
Myotis lucifugus ENSMLUG00000013837 possible_ortholog 1 retrogene
retro_mluc_283,
Macaca mulatta ENSMMUG00000009948 possible_ortholog 2 retrogenes
retro_mmul_1085, retro_mmul_2518,
Mus musculus ENSMUSG00000028800 ortholog_one2many 1 retrogene
retro_mmus_153,
Otolemur garnettii ENSOGAG00000005709 ortholog_one2one 3 retrogenes
retro_ogar_2181, retro_ogar_3022, retro_ogar_3313,
Pelodiscus sinensis ENSPSIG00000004134 ortholog_one2one 1 retrogene
retro_psin_44,
Sarcophilus harrisii ENSSHAG00000008787 possible_ortholog 1 retrogene
retro_shar_573,
Tursiops truncatus ENSTTRG00000015043 within_species_paralog 1 retrogene
retro_ttru_462,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_1236 87.73 75.23
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Download FASTA sequences of all ENSTTRG00000001613 retrocopies