Parental gene:

ENSVPAG00000000013

Aliases:None
Description:None
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3533:9032..70872(-)


>ENSVPAG00000000013
AGCGGCTCCGGCGGCGGGGAGGGCAGCGGCCAGGCTGCCCAGCTTCGCGAAGGCTCTAGGGCCGCGGCCCGCAGGCACCC
GGCTTGCGCCGCGCCGCCGCCACGACTAAGAGGAAGGTCAGTTCCGCCGAGGGGGCGGCGAAGGAGGAGCCCAAGAGAAG
ATCGGCGAGGTTGTCAGCTAAACCTGCTCCTGCAAAAGTGGAAACGAAGCCAAAAAAGGCGGCAGGAAAGGATAAATCTT
CAGGCAAAAAAGTGCAAACAAAAGGGAAAAGGGGAGCAAAGGGAAAACAGGCTGAAGTGGCTAACCAAGAGCCTAAAGAA
GATTTACCTGCAGAAAACGGAGAAACTAAAAATGAGGAGAGCCCAGCCTCTGATGAAGCAGGAGAGAAAGAAGCCAAGTC
TGATTAATAGCACACCTGGTCTTATCAGTGGTCCCTGTCTCCCTTCTTGTACAATCCAGAGGAATATTTTTATCAACTAT
TTTGTAAATGCAAGTTTTTTAGTAGCTCTAGAAACATTTTTAAGAAGGAGGGAATCCCACCTCATCCCATTTTTTAAGTG
TAAATGCTTTTTTTTAAGAGGTGAAATCATTTGCTGGTTGTTTATTTTTTACAACCAGAAAATATGGGATATTGAATGGG
AGGCTTTGATTGTCTTCAGTGTCAGCTTAACATTCCATAGATGGGGGAGTTTTTATATCCTATAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005727 ortholog_one2one 4 retrogenes
retro_cjac_1105, retro_cjac_1412, retro_cjac_2018, retro_cjac_4230,
Gorilla gorilla ENSGGOG00000013672 ortholog_one2many 6 retrogenes
retro_ggor_107, retro_ggor_145, retro_ggor_16, retro_ggor_2248, retro_ggor_48, retro_ggor_49,
Otolemur garnettii ENSOGAG00000033084 ortholog_one2one 3 retrogenes
retro_ogar_1799, retro_ogar_2793, retro_ogar_3104,
Tarsius syrichta ENSTSYG00000005812 ortholog_one2one 15 retrogenes
retro_tsyr_1029, retro_tsyr_1109, retro_tsyr_1203, retro_tsyr_1209, retro_tsyr_1243, retro_tsyr_1318, retro_tsyr_1904, retro_tsyr_1956, retro_tsyr_310, retro_tsyr_399, retro_tsyr_652, retro_tsyr_664, retro_tsyr_680, retro_tsyr_728, retro_tsyr_913,
Tursiops truncatus ENSTTRG00000015372 ortholog_one2one 12 retrogenes
retro_ttru_1034, retro_ttru_129, retro_ttru_1511, retro_ttru_1682, retro_ttru_1714, retro_ttru_200, retro_ttru_337, retro_ttru_373, retro_ttru_558, retro_ttru_61, retro_ttru_680, retro_ttru_980,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_66 50.70 58.97
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2. retro_vpac_146 73.15 89.74
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3. retro_vpac_216 72.63 73.08
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4. retro_vpac_248 63.80 66.67
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5. retro_vpac_371 72.54 58.55
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6. retro_vpac_499 58.49 65.81
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7. retro_vpac_557 60.37 67.09
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Download FASTA sequences of all ENSVPAG00000000013 retrocopies