Parental gene: | GRMZM2G087186 |
| Aliases: | None |
| Description: | Pyruvate decarboxylase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q05327] |
| Organism: | Maize (Zea mays) |
| Coordinates: | 1:45517323..45520500(-) |
>GRMZM2G087186
ATGGACACCCATATCGGATCCGTGAACGGGGCGGCGTCGAACCAGACGGTTGGCTGCCCGGCGTCGGCGCCGGGGTGCCC
GATGGCGTCCACGCCGGCGCAGCCCGCGGCGACCCTGTCGGCGGGGGAGGCGTCGCTGGGGCGCCACCTCGCGCGTCGCC
TCGTGCAGGTCGGCGTCAACGATGTATTCGCGGTTCCGGGGGACTTCAACCTCACGCTGCTCGACCACCTGATCGCCGAG
CCCGGCCTGCGCCTCGTCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCCGCCGACGGGTACGCGCGCGCGCGCGGCGT
CGGGGCCTGCGCCGTCACGTTCACAGTCGGGGGGCTCAGCGTGCTCAACGCCATCGCGGGCGCCTACAGCGAGAACCTGC
CCGTCATCTGCATCGCCGGCGGGCCCAACTCCAACGACTACGGGACCAACCGCATCCTCCACCACACCATCGGCCTCCCC
GACTTCTCGCAGGAGCTCCGCTGCTTCCAGACCGTCACCTGCCATCAGGCGGTGGTGAACAATCTGGATGACGCGCACGA
GCAGATCGACACGGCCATTGCCACGGCACTGAGGGAGAGCAAGCCCGTGTACCTCAGCATCAGCTGCAACCTCCCTGGGC
TGCCTCATCCTACCTTCAGCCGCGACCCAGTGCCCTTCTTCCTCACCCCCAGGACGAGCAACAAGATGGGGCTAGAGGCT
GCAGTGGAGGCAACTGTCGAATTCCTGAACAAGGCGGTGAAGCCAGTCCTTGTCGCCGGCCCCAAACTGCGTGTGGCAAA
GGCAGGAAAGGCATTTGTCGATATGGTAGATGCCAGTGGCTATGCCTATGCCGTGATGCCATCGGCCAAGGGTCTTGTGC
CAGAGACTCACCCCCACTTCATCGGCACCTACTGGGGCGCCGTCAGCACCGCCTTCTGTGCGGAGATTGTTGAGTCCGCA
GATGCCTACCTCTTTGCAGGCCCCATTTTCAATGACTACAGCTCTGTTGGCTACTCATTCCTCCTCAAGAAGGAAAAGGC
CATCATCGTCCAGCCTGAGCGTGTGATAGTGGGGAATGGGCCGGCATTCGGATGTGTGATGATGAAAGAGTTCTTGTCTG
AATTGGCTAAGAGGGTTAATAAGAACACCACTGCCTATGAGAATTACAAGAGGATCTTTGTACCTGAGGGCCAGCCGCTG
GAAAGCGAGCCAAATGAGCCACTGCGAGTGAATGTGCTCTTCAAGCACGTCCAGAAGATGTTGACTGGTGATAGCGCGGT
GATTGCTGAGACTGGTGACTCCTGGTTCAACTGCCAGAAGCTTAAGCTGCCAGAAGGCTGTGGGTATGAATTCCAAATGC
AGTATGGTTCGATTGGATGGTCAGTGGGTGCATTGCTCGGATATGCTCAGGGTGCGAACCACAAGCGTGTGATTGCCTTC
ATTGGTGATGGGAGCTTCCAGGTTACAGCACAGGATGTGTCAACTATGCTGCGATGTGAGCAGAACAGCATAATCTTCCT
GATCAACAACGGTGGGTACACGATTGAGGTGGAAATCCATGACGGGCCATACAACGTCATCAAGAACTGGAACTACACTG
GCTTTGTGGACGCCATCCACAATGGCTTGGGCAAGTGCTGGACCTCCAAGGTGAAGAGCGAGGAGGAGCTGACGGCTGCC
ATTGAGACAGCGCTAGGGGAGAAGAAGGACTGCCTGTGCTTCATCGAGGTGATCGCGCACAAGGACGACACCAGCAAAGA
GCTGCTGGAATGGGGCTCTAGGGTTTCTGCCGCCAACTCCCGGCCACCAAATCCTCAGTAG
ATGGACACCCATATCGGATCCGTGAACGGGGCGGCGTCGAACCAGACGGTTGGCTGCCCGGCGTCGGCGCCGGGGTGCCC
GATGGCGTCCACGCCGGCGCAGCCCGCGGCGACCCTGTCGGCGGGGGAGGCGTCGCTGGGGCGCCACCTCGCGCGTCGCC
TCGTGCAGGTCGGCGTCAACGATGTATTCGCGGTTCCGGGGGACTTCAACCTCACGCTGCTCGACCACCTGATCGCCGAG
CCCGGCCTGCGCCTCGTCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCCGCCGACGGGTACGCGCGCGCGCGCGGCGT
CGGGGCCTGCGCCGTCACGTTCACAGTCGGGGGGCTCAGCGTGCTCAACGCCATCGCGGGCGCCTACAGCGAGAACCTGC
CCGTCATCTGCATCGCCGGCGGGCCCAACTCCAACGACTACGGGACCAACCGCATCCTCCACCACACCATCGGCCTCCCC
GACTTCTCGCAGGAGCTCCGCTGCTTCCAGACCGTCACCTGCCATCAGGCGGTGGTGAACAATCTGGATGACGCGCACGA
GCAGATCGACACGGCCATTGCCACGGCACTGAGGGAGAGCAAGCCCGTGTACCTCAGCATCAGCTGCAACCTCCCTGGGC
TGCCTCATCCTACCTTCAGCCGCGACCCAGTGCCCTTCTTCCTCACCCCCAGGACGAGCAACAAGATGGGGCTAGAGGCT
GCAGTGGAGGCAACTGTCGAATTCCTGAACAAGGCGGTGAAGCCAGTCCTTGTCGCCGGCCCCAAACTGCGTGTGGCAAA
GGCAGGAAAGGCATTTGTCGATATGGTAGATGCCAGTGGCTATGCCTATGCCGTGATGCCATCGGCCAAGGGTCTTGTGC
CAGAGACTCACCCCCACTTCATCGGCACCTACTGGGGCGCCGTCAGCACCGCCTTCTGTGCGGAGATTGTTGAGTCCGCA
GATGCCTACCTCTTTGCAGGCCCCATTTTCAATGACTACAGCTCTGTTGGCTACTCATTCCTCCTCAAGAAGGAAAAGGC
CATCATCGTCCAGCCTGAGCGTGTGATAGTGGGGAATGGGCCGGCATTCGGATGTGTGATGATGAAAGAGTTCTTGTCTG
AATTGGCTAAGAGGGTTAATAAGAACACCACTGCCTATGAGAATTACAAGAGGATCTTTGTACCTGAGGGCCAGCCGCTG
GAAAGCGAGCCAAATGAGCCACTGCGAGTGAATGTGCTCTTCAAGCACGTCCAGAAGATGTTGACTGGTGATAGCGCGGT
GATTGCTGAGACTGGTGACTCCTGGTTCAACTGCCAGAAGCTTAAGCTGCCAGAAGGCTGTGGGTATGAATTCCAAATGC
AGTATGGTTCGATTGGATGGTCAGTGGGTGCATTGCTCGGATATGCTCAGGGTGCGAACCACAAGCGTGTGATTGCCTTC
ATTGGTGATGGGAGCTTCCAGGTTACAGCACAGGATGTGTCAACTATGCTGCGATGTGAGCAGAACAGCATAATCTTCCT
GATCAACAACGGTGGGTACACGATTGAGGTGGAAATCCATGACGGGCCATACAACGTCATCAAGAACTGGAACTACACTG
GCTTTGTGGACGCCATCCACAATGGCTTGGGCAAGTGCTGGACCTCCAAGGTGAAGAGCGAGGAGGAGCTGACGGCTGCC
ATTGAGACAGCGCTAGGGGAGAAGAAGGACTGCCTGTGCTTCATCGAGGTGATCGCGCACAAGGACGACACCAGCAAAGA
GCTGCTGGAATGGGGCTCTAGGGTTTCTGCCGCCAACTCCCGGCCACCAAATCCTCAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza barthii | OBART03G13620 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM03G13720 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI02G33690 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC03G13130 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI03G14280 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_zmay_12 | 80.76 | 99.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all GRMZM2G087186 retrocopies