Parental gene: | ONIVA05G24490 |
| Aliases: | None |
| Description: | None |
| Organism: | Indian wild rice (Oryza nivara) |
| Coordinates: | 5:23979751..23983336(-) |
>ONIVA05G24490
ATGAGGAAGGCGGCGGCGGCGGCGGTCGCGGCAGCGGCGGCGGTCGGCGTGGCGCTGCTGGTGCGCCGGCAGCTGCGGGA
GGCGAAGCGGTGGGGCCGGGCCGACGCGGTGCTGCGGGAGCTGGAGGAGCGGTGCGCGGCGCCGCCGGCGCGGCTGCGGC
AGGTGGCGGACGCGATGGCCGTCGAGATGCACGCCGGGCTCGCCTCCGAGGGCGGGAGCAAACTCAAGATGATCATCAGC
TACGTCGACGCCCTCCCTTCCGGGGAAGAGAAGGGGGTGTTTTATGCGCTTGACCTTGGAGGTACAAATTTCCGTGTTTT
ACGGGTTCAATTAGGTGGCAAGGAAGGGAGAGTTATCAAGCAAGAACATGACGAGATTTCAATTCCTCCGCATCTGATGA
CTGGTGGTTCAAATGAACTATTTGATTTTATTGCTTCTTCTTTAGCAAAATTTGTTGCTTCAGAGGGTGAAGACTTTCAT
CTTGCTGAGGGGAGGCAGAGAGAACTTGGCTTTACGTTCTCTTTCCCAGTAAAGCAAACTTCAATTGCATCTGGCACTCT
TATTAATTGGACTAAGGGTTTTTCGATTGATGAAACGGTTGGTGAAGATGTTGTGACTGAATTAACCAAGGCTCTTGAAC
GCCAGGGGCTTGATATGAAAGTCACAGCATTGATAAATGATACTATAGGGACATTGGCTGGTGGGAGATATGATGATAAT
GATGTCATTGCTGCTGTTATACTGGGAACAGGTACTAATGCAGCATACGTGGAACGTGCCAATGCAATTCCTAAATGGCA
TGACCTCCTGCCGAAGTCAGGAGATATGGTAATAAATATGGAATGGGGGAACTTCAGGTCATCCCATCTTCCTTTGACTG
AATTCGATCAAGCATTAGATGCTGAAAGTTTGAATCCTGGTGAACAGGTTTACGAAAAGTTGATCTCTGGCATGTATTTG
GGAGAAATTGTTCGTAGAGTCCTATTAAAGATGGCTGAAGAAGCTTCTCTTTTTGGTGATGAAGTACCACCAAAACTCAA
GATTCCATTTATTATCAGGACTCCATACATGTCAATGATGCACTGCGACAGATCACCTGATCTCAGAACAGTTGGAGCGA
AACTGAAAGATATCCTGGGGGTCCAAAGCACCTCCCTTAAAACAAGAAGGCTTGTGGTGGATGTCTGCGACATCGTTGCG
AAACGCGCCGCTTGCCTTGCTGCTGCAGGGATACACGGGATCCTGAAGAAGCTTGGGCGTGACGTCCCCAACACCGACAA
GCAGAGGACGGTGATCGCTGTCAACGGTGGGCTCTACGAGCACTACACCATCTTCGCCGAGTGCGTGGAGAGCACCCTGA
GGGACGTGCTTGGGGAGGAGGTGTCCTCCACCATTGTCATCAAGCTCGCCAAGGACGGGTCAGGCATTGGCGCTGCCCTC
CTTGCTGCGGCTCATTCTCAATACCGTGAGGCTGAGGAGCTCTAG
ATGAGGAAGGCGGCGGCGGCGGCGGTCGCGGCAGCGGCGGCGGTCGGCGTGGCGCTGCTGGTGCGCCGGCAGCTGCGGGA
GGCGAAGCGGTGGGGCCGGGCCGACGCGGTGCTGCGGGAGCTGGAGGAGCGGTGCGCGGCGCCGCCGGCGCGGCTGCGGC
AGGTGGCGGACGCGATGGCCGTCGAGATGCACGCCGGGCTCGCCTCCGAGGGCGGGAGCAAACTCAAGATGATCATCAGC
TACGTCGACGCCCTCCCTTCCGGGGAAGAGAAGGGGGTGTTTTATGCGCTTGACCTTGGAGGTACAAATTTCCGTGTTTT
ACGGGTTCAATTAGGTGGCAAGGAAGGGAGAGTTATCAAGCAAGAACATGACGAGATTTCAATTCCTCCGCATCTGATGA
CTGGTGGTTCAAATGAACTATTTGATTTTATTGCTTCTTCTTTAGCAAAATTTGTTGCTTCAGAGGGTGAAGACTTTCAT
CTTGCTGAGGGGAGGCAGAGAGAACTTGGCTTTACGTTCTCTTTCCCAGTAAAGCAAACTTCAATTGCATCTGGCACTCT
TATTAATTGGACTAAGGGTTTTTCGATTGATGAAACGGTTGGTGAAGATGTTGTGACTGAATTAACCAAGGCTCTTGAAC
GCCAGGGGCTTGATATGAAAGTCACAGCATTGATAAATGATACTATAGGGACATTGGCTGGTGGGAGATATGATGATAAT
GATGTCATTGCTGCTGTTATACTGGGAACAGGTACTAATGCAGCATACGTGGAACGTGCCAATGCAATTCCTAAATGGCA
TGACCTCCTGCCGAAGTCAGGAGATATGGTAATAAATATGGAATGGGGGAACTTCAGGTCATCCCATCTTCCTTTGACTG
AATTCGATCAAGCATTAGATGCTGAAAGTTTGAATCCTGGTGAACAGGTTTACGAAAAGTTGATCTCTGGCATGTATTTG
GGAGAAATTGTTCGTAGAGTCCTATTAAAGATGGCTGAAGAAGCTTCTCTTTTTGGTGATGAAGTACCACCAAAACTCAA
GATTCCATTTATTATCAGGACTCCATACATGTCAATGATGCACTGCGACAGATCACCTGATCTCAGAACAGTTGGAGCGA
AACTGAAAGATATCCTGGGGGTCCAAAGCACCTCCCTTAAAACAAGAAGGCTTGTGGTGGATGTCTGCGACATCGTTGCG
AAACGCGCCGCTTGCCTTGCTGCTGCAGGGATACACGGGATCCTGAAGAAGCTTGGGCGTGACGTCCCCAACACCGACAA
GCAGAGGACGGTGATCGCTGTCAACGGTGGGCTCTACGAGCACTACACCATCTTCGCCGAGTGCGTGGAGAGCACCCTGA
GGGACGTGCTTGGGGAGGAGGTGTCCTCCACCATTGTCATCAAGCTCGCCAAGGACGGGTCAGGCATTGGCGCTGCCCTC
CTTGCTGCGGCTCATTCTCAATACCGTGAGGCTGAGGAGCTCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA017675 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART05G23750 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G25120 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI05G25500 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oniv_15 | 63.12 | 91.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ONIVA05G24490 retrocopies