Parental gene: | POPTRDRAFT_265682, POPTR_0015s05560 |
| Aliases: | None |
| Description: | Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9N364] |
| Organism: | Western balsam poplar (Populus trichocarpa) |
| Coordinates: | 15:5896535..5903487(-) |
>POPTR_0015s05560
ATGGAAACGACGCCGTCAGAGTCATCTTCTACGCCATCAACAACAGTACCAAAGAAGAAGCAAGGATTAGGATGGGTAGA
ATGGCTAAGAGGATGGATGTACATACTATACGAGATGTTATTTCAGCGAATCATGGCTAGTCACTTGCAGAACCCTCTCT
CTTTACCTCCTATCAACAATCTCACTTGCATTGTCACCGGATCCACCAGCGGTATCGGTCTCCAAATCGCCAGGCAATTG
GCGGAATCCGGAGCCCATGTTGTTATGGCTGTTAGGAATACCAAAGCAGCGCATGATTTGATTCATAAATGGCAGTCCGA
ATGGACTGGACTCGGCCTTCCTCTTAATATCGAGGTGATGGAGCTTGATCTTTTGTCCTTGGAATCGGTTTCGAGGTTTG
CCGAAGCCTGGAATGCGCGAATGGGACCTTTGCATGTTCTTATTAATAACGCTGGAATATTTTCCATTAGAGGACCACAA
AAGTTCTCAAAGGATGGGTATGAAGAACACATGCAAGTGAATCATCTAGCTCCAGCATTGCTTTCGATATTGCTTTTGCC
ATCCTTAATTAGAGGCTCTCCAAGCAGAATTATCAATGTGAATTCAGTTATGCATTATGTTGGCTTCGTTGACACTGAAG
ACATGAATGTTATTTCTGGAAAGAGAAAGTATACAAGCTTAGTTGGATACACCGGCAGCAAGTTAGCACAGGTCATGTTT
AGTAGTGTTCTGCACAGGCGGCTTCCAGCTGAATCTGGCATCAGTGTATTATGTGTTTCCCCTGGAGTAGTCCAAACGAA
TGTTGCAAGGGATCTTCCCAAAATTGTGCAAGCTGGTTATCACCTAATACCGTATTTTATCTTCAATGCCCAAGAAGGTT
CCAGGAGTGCTCTTTTTTCAGCAACTGATCCTCAGATTCCTGAATACTGTGAGTTGTTAAAATCAGATGACTGGCCAGTT
TGTGCATTCATTTCTCAAGATTGTCGACCAACAAATCCTTCCGAAGAAGCACACAACATCGACACCGCGTATGAAGTGTG
GGAGAAGACTTTAGAGATGATCGGCCTGCCTTCGGATGCTATAGAGAAGTTAATAGAAGGGGAAGAAGTTAGGTGCCGTT
ATGGGGAACGTCAGGAGTAG
ATGGAAACGACGCCGTCAGAGTCATCTTCTACGCCATCAACAACAGTACCAAAGAAGAAGCAAGGATTAGGATGGGTAGA
ATGGCTAAGAGGATGGATGTACATACTATACGAGATGTTATTTCAGCGAATCATGGCTAGTCACTTGCAGAACCCTCTCT
CTTTACCTCCTATCAACAATCTCACTTGCATTGTCACCGGATCCACCAGCGGTATCGGTCTCCAAATCGCCAGGCAATTG
GCGGAATCCGGAGCCCATGTTGTTATGGCTGTTAGGAATACCAAAGCAGCGCATGATTTGATTCATAAATGGCAGTCCGA
ATGGACTGGACTCGGCCTTCCTCTTAATATCGAGGTGATGGAGCTTGATCTTTTGTCCTTGGAATCGGTTTCGAGGTTTG
CCGAAGCCTGGAATGCGCGAATGGGACCTTTGCATGTTCTTATTAATAACGCTGGAATATTTTCCATTAGAGGACCACAA
AAGTTCTCAAAGGATGGGTATGAAGAACACATGCAAGTGAATCATCTAGCTCCAGCATTGCTTTCGATATTGCTTTTGCC
ATCCTTAATTAGAGGCTCTCCAAGCAGAATTATCAATGTGAATTCAGTTATGCATTATGTTGGCTTCGTTGACACTGAAG
ACATGAATGTTATTTCTGGAAAGAGAAAGTATACAAGCTTAGTTGGATACACCGGCAGCAAGTTAGCACAGGTCATGTTT
AGTAGTGTTCTGCACAGGCGGCTTCCAGCTGAATCTGGCATCAGTGTATTATGTGTTTCCCCTGGAGTAGTCCAAACGAA
TGTTGCAAGGGATCTTCCCAAAATTGTGCAAGCTGGTTATCACCTAATACCGTATTTTATCTTCAATGCCCAAGAAGGTT
CCAGGAGTGCTCTTTTTTCAGCAACTGATCCTCAGATTCCTGAATACTGTGAGTTGTTAAAATCAGATGACTGGCCAGTT
TGTGCATTCATTTCTCAAGATTGTCGACCAACAAATCCTTCCGAAGAAGCACACAACATCGACACCGCGTATGAAGTGTG
GGAGAAGACTTTAGAGATGATCGGCCTGCCTTCGGATGCTATAGAGAAGTTAATAGAAGGGGAAGAAGTTAGGTGCCGTT
ATGGGGAACGTCAGGAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Solanum tuberosum | PGSC0003DMG400010157 | ortholog_one2one | 1 retrogene | |
| Solanum lycopersicum | Solyc03g098460.2 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptri_15 | 67.76 | 96.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all POPTR_0015s05560 retrocopies