Parental gene: | TCM_026035 |
| Aliases: | None |
| Description: | Small basic intrinsic protein 1 |
| Organism: | Cacao (Theobroma cacao) |
| Coordinates: | 5:36174614..36177393(-) |
>TCM_026035
ATGGGTCCGATAAAGATGGCAATCTGGGACATGTTGATTACTTTCATGTGGGTTTTTTTTGCATCGACGTTCGGTTTACT
AACTTCCTTGATAGCCACTGCCATTGGTGTCCAAACCGTAACGTGGGCTCCTATTGTTATCACCACTGTCATCATTTTCG
TTTTCGTTTTCATCTTTAATATTATCGGTGGATATCTTGGTGGGGCTAGCTTTAATCCCACTGGTACAGCCTCCTTCTAC
GCCGCCGGGGTCGGTGACGATAGCCTTATCTCCATGGCGCTCCGGTTCCCAGCTCAGGCAGCTGGTGCCGTGGGCGGTGC
CCTGGCAATCATGGAGGTGATACCGGAACAGTACAAGCACATGATAGGGGGACCATCTTTGCAAGTAGATACACACACTG
GAGCCATTGCTGAGGGGGTGTTGACTTTTCTAATTACCTTTGCTGTTCTTCTAATCATTCTTAGAGGTCCACACAGTGAA
ATGTTCAAGGCATGGTTGCTTGCCATTGCGACTGTAGCATTAGTTCTGGCCGGTACCTCTTACACCGGACCTTCCATGAA
TCCTGCCAATGCCTTTGGTTGGGCATATGTGAACAGCTGGCACAACACATGGGATCAGTTTTATGTTTATTGGATCTGTC
CATTCATTGGAGCTATATTAGCTGCCTGGGTCTTCCGACTTTTCTTCCCTCCGTCACCGGTGAAGGTGAAGAAGGCCTAA
ATGGGTCCGATAAAGATGGCAATCTGGGACATGTTGATTACTTTCATGTGGGTTTTTTTTGCATCGACGTTCGGTTTACT
AACTTCCTTGATAGCCACTGCCATTGGTGTCCAAACCGTAACGTGGGCTCCTATTGTTATCACCACTGTCATCATTTTCG
TTTTCGTTTTCATCTTTAATATTATCGGTGGATATCTTGGTGGGGCTAGCTTTAATCCCACTGGTACAGCCTCCTTCTAC
GCCGCCGGGGTCGGTGACGATAGCCTTATCTCCATGGCGCTCCGGTTCCCAGCTCAGGCAGCTGGTGCCGTGGGCGGTGC
CCTGGCAATCATGGAGGTGATACCGGAACAGTACAAGCACATGATAGGGGGACCATCTTTGCAAGTAGATACACACACTG
GAGCCATTGCTGAGGGGGTGTTGACTTTTCTAATTACCTTTGCTGTTCTTCTAATCATTCTTAGAGGTCCACACAGTGAA
ATGTTCAAGGCATGGTTGCTTGCCATTGCGACTGTAGCATTAGTTCTGGCCGGTACCTCTTACACCGGACCTTCCATGAA
TCCTGCCAATGCCTTTGGTTGGGCATATGTGAACAGCTGGCACAACACATGGGATCAGTTTTATGTTTATTGGATCTGTC
CATTCATTGGAGCTATATTAGCTGCCTGGGTCTTCCGACTTTTCTTCCCTCCGTCACCGGTGAAGGTGAAGAAGGCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Medicago truncatula | MTR_7g085070 | ortholog_one2many | 1 retrogene | |
| Populus trichocarpa | POPTR_0013s05030 | ortholog_one2many | 1 retrogene | |
| Prunus persica | PRUPE_ppa010591mg | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tcac_30 | 59.50 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all TCM_026035 retrocopies