Parental gene:

fgenesh2_kg.1__2288__AT1G20960.1

Aliases:None
Description:EMB1507 [Source:UniProtKB/TrEMBL;Acc:D7KJW4]
Organism:Lyre-leaved rock-cress (Arabidopsis lyrata)
Coordinates:1:8983744..8992266(-)


>fgenesh2_kg.1__2288__AT1G20960.1
ATGGCGAACTTGGGAGGCGGTGCGGAAGCACATGCCAGGTTCAAGCAGTATGAGTACAGAGCCAATTCTAGTCTGGTGTT
AACTACTGATAATCGTCCTCGCGATACTCATGAGCCTACAGGAGAACCGGAAACTCTGTGGGGGAAAATTGATCCGAGGT
CTTTTGGTGACCGTGTTGCTAAGGGGAGGCCTCAGGAGTTGGAGGATAAGCTTAAAAAGTCTAAGAAGAAGGAACGTGAT
GTTGTTGATGATACTGCTAATGTTAGGCAGAGTAAGAGGCGTCGTCTAAGGGAAGAGAGCGTTCTAACTGATACTGATGA
TGCGGTTTATCAGCCAAAGACTAAGGAGACAAGGGCTGCTTATGAGGCCATGCTTAGTCTAATTCAGCAGCAGTTGGGTG
GGCAACCTCTGAGTATTGTTAGTGGTGCTGCAGATGAGATTTTGGCTGTTCTCAAGAACGATACATTTAGAAACCCTGAG
AAAAAGATGGAGATCGAGAAGTTGCTGAACCATATTGAAAACCATGAGTTTGATCAGCTTGTTTCCATTGGAAAGTTGAT
CACGGACTTTCAAGAGGGTGGTGATTCTGGTGGTGGTAAAGCTGATGAGGAAGAAGGACTAGATGATGATTTGGGCGTGG
CGGTTGAGTTTGAGGAGAATGAAGAAGACGATGATGAGAGTGATCCCGATATGGTTCAAGAGGAAGATGATGAGGAGGAT
GAAGAGCCTACCAGAACTGGAGGCATGCAGGTTGATGCTGGGATCAATGATCAGGATGCAGGAGATGCAAATGAGGGCGC
AAATCTTAATGTTCAAGACATTGATGCATATTGGCTCCAGAGAAAGATCTCTCAAGCATATGAACAGCAGATTGATCCAC
AACAATGCCAGGTACTTGCAGAAGAGCTGCTTAAGGTACTCGCTGAAGGGGATGATAGGGTTGTTGAGAACAAGCTGCTT
ATGCACCTTCAGTTCGAAAAGTTTAGCCTTGTTAAGTTTCTGCTGCGGAATCGTCTTAAAGTTGTGTGGTGCACTCGTTT
GGCTAGGGCAGAAGACCAGGAAGAGAGGAAGAGAATTGAGGAGGAGATGAGGGGGTTGGGCCCAGAGTTGACTGCTATTG
TGGAGCAGTTGCATGCAACAAGAGCAACAGCGAAAGAGAGGGAGGAGAACCTGCAAAAAAGTATTAACGAAGAAGCCCGA
CGTTTGAAGGACGAAACTGGTGGAGATGGAGGCAGACGCAGGAGAGATGTTGCTGATAGAGATTCAGAGAGTGGCTGGGT
GAAGGGTCAGCGTCAGATGCTGGACCTGGAGAGCTTGGCTTTTGACCAAGGTGGTCTCCTGATGGCGAATAAGAAGTGTG
ACCTTCCCCCTGGCTCTTACAGAAGTCATGGCAAGGGATATGATGAAGTTCATGTGCCATGGGTTTCTAAAAAGGTCGAT
AGCAATGAGAAGCTTGTGAAGATTACGGAAATGCCTGATTGGGCGCAACCGGCTTTTAAGGGAATGCAACAGTTAAACAG
GGTTCAGAGCAAAGTGTATGACACTGCACTTTTTAAGGCAGAGAACCTTCTTCTTTGTGCTCCAACTGGTGCTGGGAAAA
CCAATGTTGCTATGCTCACCATACTGCAGCAACTTGAAATGAATAGGAACAAAGATGGAACTTATAACCATGGAGATTAC
AAAATTGTCTATGTTGCACCCATGAAAGCCCTTGTTGCTGAAGTTGTAGGTAATTTGTCTAATCGTCTGAAGGATTATGG
AGTTACTGTGAGAGAACTCAGTGGGGATCAGTCCCTAACCGGGAGAGAAATTGAAGAGACTCAGATAATTGTTACCACAC
CAGAGAAATGGGATATCATCACTAGGAAGTCTGGAGACCGAACTTACACTCAGCTTGTAAGACTTCTTATAATTGATGAA
ATTCATCTCCTTCATGATAATCGAGGGCCTGTGCTTGAAAGCATTGTCGCTAGGACTCTTAGGCAAATTGAAACCACGAA
AGAGAATATTCGTCTGGTTGGTTTATCTGCTACACTGCCAAATTATGAAGACGTGGCCTTGTTTTTGCGGGTTGATCTTA
AGAAAGGTTTGTTTAAATTTGACCGCAGCTACAGACCCGTGCCTCTCCATCAGCAGTATATTGGAATCAGTGTGAAGAAA
CCGTTGCAGAGGTTCCAGTTGATGAATGATCTATGTTATCAGAAAGTTTTGGCAGGTGCTGGAAAGCACCAGGTCCTTAT
TTTTGTTCATTCAAGGAAGGAAACAGCGAAAACTGCTAAAGCAATACGGGACACTGCAATGGCAAACGATACCCTCAGCA
GATTCTTGAAGGAAGATAGTGTAACTCGTGAAGTTCTCCAGAGTCATGTTGACATTGTTAAAAATGGTGAGCTGAAAAAT
ATTCTGCCTTACGGTTTTGCAATTCATCATGCTGGGTTAACAAGGGGTGATCGTGAGATCGTTGAGAATCTTTTTGCTCA
GGGGCATGTGCAAGTCTTGGTTTCCACAGCAACTCTCGCATGGGGTGTGAATCTGCCTGCACATACCGTTATTATAAAAG
GAACCCAGGTGTATAATCCTGAAAAAGGGGCGTGGATGGAGCTGAGTCCTCTAGATGTTATGCAGATGCTTGGTCGTGCT
GGAAGACCTCAGTATGATCGACATGGGGAGGGTATAATTATCACTGGCTACAGCGAGCTGCAATATTATCTTTCTTTGAT
GAATGAGCAACTACCTATTGAAAGCCAGTTTATTTCCAAACTTGCTGACCAGCTTAATGCTGAAATTGTGCTTGGAACCG
TTCAGAATGCTAGAGAGGCTTGCCATTGGCTTGGTTATACGTATTTATATATCCGTATGGTTCGTAATCCAACGCTGTAT
GGCTTAGCGCCTGATGCCCTTGCAAAAGACGTAGTGTTGGAGGAGAGAAGAGCTGACCTGATACATTCGGCTGCTACTAT
CTTGGACAAAAACAACTTGGTTAAGTATGACAGGAAAAGTGGATACTTCCAAGTTACAGATTTGGGACGCATTGCTAGCT
ACTATTACATAACCCATGGGACCATAGCTACATACAATGAGCATTTGAAGCCAACAATGGGTGATATAGATCTTTATCGT
CTGTTCTCCCTGAGTGAAGAGTTCAAGTATGTGACGGTTCGGCAAGATGAGAAGATGGAACTGGCGAAACTTTTGGATCG
TGTCCCGATTCCGATCAAGGAAACTTTGGAGGAGCCCAGTGCAAAAATAAATGTATTGCTGCAGGCATATATTTCACAGC
TAAAGCTTGAGGGTCTTTCTTTGACATCTGACATGGTTTACATTACTCAGAGTGCTGGACGTCTTGTGCGAGCTCTTTAT
GAAATTGTATTGAAGCGGGGATGGGCTCAACTGGCAGAGAAGGCTCTGAACTTGTCTAAAATGGTTGGGAGGAGGATGTG
GAGTGTCCAGACACCCCTGCGTCAGTTTCATGGAATCCCCAATGATATTTTAATGAACTTGGAGAAGAAGGATTTGGTGT
GGGAGAGGTACTATGATCTATCCTCACAGGAGCTAGGAGAGCTTATTCGTAGTCCTAAGATGGGCAGGCCGCTTCACAAG
TTCATTCACCAGTTCCCAAAATTGACTCTTTCTGCACATGTTCAGCCTATTACTCGCACTGTTCTGAAGGTGGAGCTCAC
AGTTACACCTGATTTCCTGTGGGACGAGAAAATTCATAAATATGTTGAGCCGTTTTGGATAATTGTGGAAGACAATGATG
GTGAAAAGATCCTTCATCACGAGTATTTTCTTTTGAAGCAGCAGTATATTGATGAGGATCACACTTTGAATTTCACTGTG
CCAATCTTTGAACCGCTGCCACCTCAGTATTTTGTTCGAGTGGTTTCAGACAAGTGGCTTGGCTCCGAGACTGTGTTGCC
TGTATCTTTCAGGCATCTTATTCTTCCAGAAAAGTATCCACCTCCGACTGAGCTACTGGACTTGCAGCCTCTCCCAGTGA
CGGCGCTAAGGAATCCGAATTATGAGATACTCTATCAGGATTTCAAGCATTTCAATCCAGTGCAGACTCAGGTCTTTACT
GTTTTGTATAACACTAACGACAATGTGTTGGTTGCTGCTCCAACGGGAAGTGGCAAAACTATTTGTGCAGAGTTCGCTAT
TTTGAGGAATCATCAAGAAGGACCTGATGCTACAATGCGTGTTGTTTATATTGCACCGCTTGAGGCTATTGCCAAGGAGC
AGTTTCGTATCTGGGAGGGGAAGTTTGGGAAGGGTCTTGGTTTACGGGTTGTTGAGCTAACTGGGGAGACAGCATTGGAT
CTTAAGCTGCTTGAGAAAGGCCAGATAATCATAAGTACTCCTGAGAAATGGGATGCTCTTTCCCGCAGGTGGAAACAGAG
AAAATACGTTCAACAAGTTAGTCTTTTCATCGTCGACGAACTCCATCTAATTGGAGGTCAAGGTGGTCCAGTGTTGGAGG
TAATCGTCTCCAGAATGAGATATATATCAAGTCAGGTCAATAATAAGATCAGGATTGTTGCGCTATCCACTTCACTTGCA
AATGCAAAAGATCTTGGGGAGTGGATTGGGGCCAGTTCCCACGGCCTTTTCAACTTCCCTCCCGGCGTCCGTCCTGTTCC
ACTGGAGATCCACATTCAGGGAGTGGATATATCCAGTTTTGAAGCCAGGATGCAGGCGATGACCAAGCCAACCTACACCG
CCATAGTTCAGCACGCAAAGAACAAGAAGCCGGCTATTGTTTTCGTCCCAACCCGTAAACATGTCCGCTTGACTGCTGTG
GATCTAATGGCTTATTCTCACATGGATAACCCGCAGAGTCCTGATTTCTTGTTAGGGCAACTGGAAGAACTGGACCCTTT
TGTTAGCCAAATCCGCGAGGAAACACTGAAGGAAACACTGCGTCATGGTATTGGGTACCTGCATGAGGGTTTAAGCAGTC
TTGATCAGGAGATTGTGACACAGCTCTTTGAAGCTGGACGGATTCAGGCTTGTGTGATGAGCAGTTCATTGTGTTGGGGT
ACTCCATTAACTGCGCATTTGGTGGTCGTAATGGGGACACAGTATTACGATGGGAGGGAAAATTCACATTCTGATTATCC
CGTCCCTGATCTGCTTCAGATGATGGGGCGTGCTAGCCGACCACTTCTTGACAATGCTGGGAAGTGTGTGATCTTTTGTC
ATGCACCGCAGAAAGAGTATTACAAGAAGTTTCTGTACGAAGCCTTCCCTGTGGAAAGTCAGCTCCAGCATTTCTTGCAT
GATAATTTCAACGCAGAAGTGGTTGCTGGGGTTATAGAGAACAAGCAAGATGCCGTGGATTATCTTACATGGACTTTCAT
GTACAGGAGGCTTCCCCAGAACCCTAACTACTACAATCTCCAAGGTGTTAGCCACAGGCATTTGTCTGATCACCTCTCAG
AGCTGGTTGAGAACACCTTGTCTAATCTTGAAGCCAGTAAATGCATTGAGATAGAGGATGAGATGGAACTCTCTCCTCTC
AACCTTGGTATGATTGCATCCTATTACTACATCAGTTATACCACCATTGAGCGCTTCAGTTCACTGTTGTCTTCTAAAAC
CAAGATGAAGGGACTTCTTGAGATCTTAACATCAGCTTCGGAGTATGACATGATTCCTATACGGCCTGGTGAGGAGGACA
CTGTTCGAAGATTAATCAATCACCAGAGGTTCTCTTTTGAAAACCCAAAATGCACAGACCCTCATGTGAAGGCAAACGCG
CTTCTTCAGGCGCATTTCTCAAGGCAAAACATTGGCGGGAACTTGGCAATGGATCAGCGTGATGTCCTTCTATCTGCAAC
CAGACTTCTTCAAGCGATGGTCGATGTGATATCAAGCAATGGCTGGCTGAATCTTGCTCTGTTAGCTATGGAAGTAAGCC
AGATGGTGACTCAAGGCATGTGGGAGCGGGACTCCATGCTTCTGCAGCTCCCTCACTTCACAAAGGACTTGGCCAAGAGG
TGCCAAGAGAATCCGGGGAAAAACATTGAAACCGTATTCGATCTTGTGGAGATGGAGGACGAAGAACGCCAAGAGCTTCT
CAAGATGTCAGACGCTCAGCTTCTAGACATTGCCAGATTCTGCAACCGCTTCCCAAACATCGACCTTACTTACGAGATTG
TGGGCAGTGAAGAGGTGAACCCAGGGAAAGAGGTTACATTGCAAGTGATGCTTGAGAGAGACATGGAGGGGAGGACAGAA
GTGGGACCTGTGGATTCACTCAGGTATCCCAAGACCAAAGAAGAAGGATGGTGGCTGGTCGTGGGCGACACCAAGACGAA
CCAGTTGCTGGCAATCAAGCGTGTCTCATTGCAACAGAAAGCGAAGGTGAAGCTGGATTTCACAGTACCGAGTGAACCAG
GAGAGAAGTCATACACACTATACTTCATGTGTGACTCTTACTTGGGGTGTGACCAAGAGTACTCTTTCTCTGTTGATGTC
AAAGGATCTGGCGCTGGAGATCACATGGAAGAATGA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT1G20960 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_alyr_6 83.83 100.00
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Download FASTA sequences of all fgenesh2_kg.1__2288__AT1G20960.1 retrocopies