RetrogeneDB ID: | retro_amel_89 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194789.1:102985..103279(-) | ||
Located in intron of: | ENSAMEG00000014522 | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000019460 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DPY30 | ||
Ensembl ID: | ENSAMEG00000007768 | ||
Aliases: | None | ||
Description: | dpy-30 homolog (C. elegans) [Source:HGNC Symbol;Acc:24590] |
Percent Identity: | 83.87 % |
Parental protein coverage: | 93.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | QMLEGQTQVAENPHSEYGLTDNVERIVDNEKINAEKSSKQKVDLQSLPTRAYLDQTVVPILLQGLAVLAK |
Q.L.GQ.QVAEN.HSE.GLTDN.ERIVDNEKINAE.SSKQKVDLQSL.T.AYLDQT....LLQG.AVLAK | |
Retrocopy | QHLKGQMQVAENRHSENGLTDNIERIVDNEKINAERSSKQKVDLQSLLTCAYLDQTLMSVLLQGPAVLAK |
Parental | ERPPNPIEFLASYLLKNKAQFED |
ERPPNPIEF.ASYLLKNKAQFED | |
Retrocopy | ERPPNPIEFIASYLLKNKAQFED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000007768 | 1 retrocopy |
retro_amel_89 ,
|
Canis familiaris | ENSCAFG00000005708 | 1 retrocopy | |
Equus caballus | ENSECAG00000019630 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000012471 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000006389 | 4 retrocopies | |
Felis catus | ENSFCAG00000026246 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006193 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000015346 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000015481 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000005211 | 1 retrocopy | |
Mus musculus | ENSMUSG00000024067 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000017877 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000034197 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000011833 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000005599 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000027126 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000013372 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000017486 | 5 retrocopies | |
Tarsius syrichta | ENSTSYG00000000146 | 1 retrocopy |