RetrogeneDB ID: | retro_chof_1529 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_31628:18658..19001(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AKIRIN1 | ||
Ensembl ID: | ENSCHOG00000003010 | ||
Aliases: | None | ||
Description: | akirin 1 [Source:HGNC Symbol;Acc:25744] |
Percent Identity: | 65.22 % |
Parental protein coverage: | 96.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | NIKQEYSRYQRWRHLEVVLNQSEACTSESHPHPSALTAPSSPGSSWMKKDQPT-FTLRQVGIICERLLKD |
N.....S.....R...........C.SESHPH.SALT.PSS..SSWMKKDQP..FTL..VG.ICE..LKD | |
Retrocopy | NSRAKFSQHKTCR*SQPEVETFRCCASESHPHSSALTTPSSSVSSWMKKDQPP>FTLQKVGTICEHFLKD |
Parental | YEDKIREEYEQILNTKLAEQYESFVKFTHDQIMRRYGTRPTSYVS |
.EDKI.EEYEQILNTKLAEQ.ESFVK.THDQIM..Y.TRPTSYVS | |
Retrocopy | HEDKIQEEYEQILNTKLAEQHESFVKSTHDQIMQHYETRPTSYVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |