RetrogeneDB ID: | retro_etel_1612 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_282807:10252..10622(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000008781 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000024 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.02 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSC-LGGSDNFKHLNEIDLFHCIDPNDSKHKRTD |
QPASA.W...RDYVFIEF.VEDSKDVNVNFEKSK.TFSC....SDNFK..NEI.LFHCIDPN.SKH.RTD | |
Retrocopy | QPASANW*H*RDYVFIEFYVEDSKDVNVNFEKSKFTFSC<SSKSDNFKYWNEIHLFHCIDPNYSKH-RTD |
Parental | RSI-LCCLRKG-ESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSE |
RSI.LC.L.KG.ES.QS..R.TK..AKLN.L.V.FNN.KDWEDDS.E..SNFDR.SE | |
Retrocopy | RSILLCSLPKG<ESVQSFARFTKVTAKLNCLIVAFNN*KDWEDDSVEELSNFDRVSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |