RetrogeneDB ID: | retro_pcap_434 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_86156:1476..1769(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTGES3 | ||
Ensembl ID: | ENSPCAG00000007779 | ||
Aliases: | None | ||
Description: | prostaglandin E synthase 3 (cytosolic) [Source:HGNC Symbol;Acc:16049] |
Percent Identity: | 51.92 % |
Parental protein coverage: | 63.52 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | DPDDS-KHKRTDRSI-LCCLRKGEPGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEM- |
DP.DS.K....DRSI.L.CL.KGEPGQ.WP.LTKER.K..WLSV.FN...DW....D........F.... | |
Retrocopy | DPNDS<KSQKKDRSI<LTCLHKGEPGQLWPKLTKERTKFHWLSVNFN---DWKNTQDDSDKGLPSFDHF> |
Parental | MNNMGGDEDVDLPEVDGADDDSQDSDDEKMPDLE |
..N...DED.DL.EVD.A....QDSDDE..P..E | |
Retrocopy | ITNVDSDEDADLLEVDRANSNLQDSDDEETPATE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |