RetrogeneDB ID: | retro_etel_519 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8570:10376..11113(+) | ||
Located in intron of: | ENSETEG00000019457 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.53 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MEAVAEKKKAAPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIR |
.EAVAEKK...PAVPETLKKKRRNFAELKIKRLRKKFAQKML..ARRKLIYEKAKHYHK.YRQM.RTEIR | |
Retrocopy | LEAVAEKKD--PAVPETLKKKRRNFAELKIKRLRKKFAQKMLQKARRKLIYEKAKHYHKDYRQMDRTEIR |
Parental | MARMARKAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYI |
MAR.ARKAGNF.VPGEP.LAFV.R.RG.NGVSP.VR.VLQLLRLRQI..G..VKLNKAS.N.LRIVEP.I | |
Retrocopy | MARVARKAGNFCVPGEPTLAFVLRSRGVNGVSPQVRQVLQLLRLRQIVTGTCVKLNKASMNRLRIVEPSI |
Parental | AWGYPNLKSVNELIYKRGYGKINKKRIA-LTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLW |
.W.YPNL.SVNELIYKRG.GKI.KKR.A.LT.NTLIARSLG.YG.ICMED.IHEIY.VGK.FK.ANNFLW | |
Retrocopy | TWRYPNLTSVNELIYKRGDGKITKKRVA<LTANTLIARSLGQYGTICMEDQIHEIYAVGKCFKDANNFLW |
Parental | PFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
PF..SSPRGGMKKK..HFVEGGDAGNREDQINRLIRRMN | |
Retrocopy | PFT*SSPRGGMKKKPPHFVEGGDAGNREDQINRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |