RetrogeneDB ID: | retro_meug_1076 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold27902:9959..10536(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000015590 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 56.48 % |
Parental protein coverage: | 81.01 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MNMFDRKINFDALLKFSHISPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLGLMIW |
MNM........A....SHI......HLKKV.ASF..CM.VA..GAY.HV..HFIQ.GL..AL.SL.L.IW | |
Retrocopy | MNMIKWILTGNAPFMLSHITHNS*RHLKKV*ASFSFCMIVAVIGAYLHVLVHFIQPGLFLALSSLVLLIW |
Parental | LMATPHSHETEQKRLGLLTGFAFLTGVGLGPALDLCIAINPSIIPTSFLGTAMIFSCF-TLSALYARRRS |
L..TP...ETE.KRL..L..FAFL.G..LGP.L.LCI..NP.I..TS..GT.MIFS.F.TLS..Y....S | |
Retrocopy | LLRTPYHNETEKKRLVILVVFAFLVGNELGPTLNLCIITNPDIVSTSLFGTVMIFSSF>TLSSIYVKHHS |
Parental | YLFLGGILMSAMSLMLFSSLGNLFFGSFWLFQANLYVGLVVMCGFVLFDTQLI |
YLFLGGIL.S.MSL.L..SLG.L.FG...LFQ.N...GL.V.CGF.LFD...I | |
Retrocopy | YLFLGGILISDMSLILVTSLGTLLFGPHLLFQVNVHMGLEVICGFILFDNKKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000018588 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000008400 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000021032 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000007882 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000015590 | 4 retrocopies | |
Monodelphis domestica | ENSMODG00000004277 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000005137 | 2 retrocopies | |
Pteropus vampyrus | ENSPVAG00000016821 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000010366 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000001165 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000002427 | 1 retrocopy |