RetrogeneDB ID: | retro_meug_1128 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold29924:13899..14442(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2C | ||
Ensembl ID: | ENSMEUG00000007177 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937] |
Percent Identity: | 85.79 % |
Parental protein coverage: | 99.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MASQNRDPAAAS--AAA-ARKGAEPGTSAARGSVGKRLQQELMT-LMMSGDKGISAFPESDNLFKWVGTI |
MASQNRDP.AAS..AAA...KGAEPGT.AARGSVGKRLQQ.LMT.L.M.GDKGIS.F.ESDNLFK.VGTI | |
Retrocopy | MASQNRDPEAASAAAAA<SGKGAEPGTRAARGSVGKRLQQQLMT>LIMPGDKGISVFSESDNLFK*VGTI |
Parental | HGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQ |
HGAAGTVYEDLRYK.SLEFPSGYPYNAPTVKFVTPCYH.NV.TQGNICL.ILKDKWS.LYDVRTILLSIQ | |
Retrocopy | HGAAGTVYEDLRYKISLEFPSGYPYNAPTVKFVTPCYHFNVGTQGNICLGILKDKWSSLYDVRTILLSIQ |
Parental | SLLGEPNIDSPLNTHAAELWTNPTAFKKYLQEAYMKQETSKHP |
SL.GEP.IDSPLNTHAAELWTNPTAFKKYL.E.YMKQ.TS..P | |
Retrocopy | SLVGEPSIDSPLNTHAAELWTNPTAFKKYLLETYMKQVTSEEP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |