RetrogeneDB ID: | retro_meug_1504 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold427767:607..987(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2C | ||
Ensembl ID: | ENSMEUG00000007177 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937] |
Percent Identity: | 92.97 % |
Parental protein coverage: | 70.56 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ASQNRDPAAASAAAARKGAEPGTSAARGSVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAG |
ASQNRDPAAAS..AA.KGAEPGTSAARGS.GKRLQQELMTLMMSGDKG.SAFPESDNLFKWVGTIHGAAG | |
Retrocopy | ASQNRDPAAASTTAACKGAEPGTSAARGSIGKRLQQELMTLMMSGDKGTSAFPESDNLFKWVGTIHGAAG |
Parental | TVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDTQG-NICLDILKDKWSALYDV |
TV.EDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDT...NICLDILKDKWSALYDV | |
Retrocopy | TVHEDLRYKLSLEFPSGYPYNAPTVKFVTPCYHPNVDTHA<NICLDILKDKWSALYDV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |