RetrogeneDB ID: | retro_meug_236 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_7092:19641..20072(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CACYBP | ||
Ensembl ID: | ENSMEUG00000010725 | ||
Aliases: | None | ||
Description: | calcyclin binding protein [Source:HGNC Symbol;Acc:30423] |
Percent Identity: | 84.35 % |
Parental protein coverage: | 64.86 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | DQSDKYVKIYITLNGVQQVPAENVQVQFTERSFEVLVKNLNGK-NYSMTVNNLLKPISVEGSLRKIKTDT |
D.....VKIYITLNGVQQVP.E.VQVQFTER.FEVLV.NLNGK.NYSMTVNNLLKPISVEGSLRKIK.D. | |
Retrocopy | DGINQSVKIYITLNGVQQVPTESVQVQFTERLFEVLVENLNGK<NYSMTVNNLLKPISVEGSLRKIKIDA |
Parental | VLVLC-KKKQGQKWDYLTQVEKECKEKEKSSFDNDTDPSEGLMNV-LKKIYEDGDDEMKRTINKAWVESR |
VLVLC.KKKQ.QK..YLTQ.EKECK.K.KSSFDNDTDPSEGLMNV.LKK.Y.DGDDEMKRTINKA.VESR | |
Retrocopy | VLVLC>KKKQEQK*NYLTQAEKECKVKKKSSFDNDTDPSEGLMNV<LKKTYKDGDDEMKRTINKA*VESR |
Parental | EKQAKGE |
EKQAKGE | |
Retrocopy | EKQAKGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |