RetrogeneDB ID: | retro_pcap_449 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_94161:843..1301(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CACYBP | ||
Ensembl ID: | ENSPCAG00000003742 | ||
Aliases: | None | ||
Description: | calcyclin binding protein [Source:HGNC Symbol;Acc:30423] |
Percent Identity: | 67.09 % |
Parental protein coverage: | 98.72 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | ASALEELQKDLEEVKVLLEKTTRKRVRDALTAEKSKIETEIKNKMQQKSQ-GKADPL-DGEKPAAVVAPI |
AS.LEELQKDLEEVKVLL....RKRV.DAL..EKSK.ET....K.QQ.SQ.GKADPL.D.E.P.A.VA.I | |
Retrocopy | ASTLEELQKDLEEVKVLL*NPSRKRVHDALPLEKSKDETGLMSKRQQTSQ<GKADPL<DSERPEAEVALI |
Parental | T-MGYTVKISNYGWDQSDKFVKIYITLTGVHQVPPENV-QVHFTERSFDLLVKNLNGKSYSMIVNNLLKP |
..M...V.I...GW.QSD.FV.I.ITL.GVHQ..PENV......E.SFDLLVKNLNGK..SM..NNLLKP | |
Retrocopy | K<MASMVTIEY*GWGQSDAFVIISITLLGVHQDLPENV<EAPSPESSFDLLVKNLNGKRFSMLSNNLLKP |
Parental | ISVEGSSKKVKTDTVLIL |
ISVEGSSK.VK..TVLIL | |
Retrocopy | ISVEGSSKEVKMATVLIL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |