RetrogeneDB ID: | retro_meug_293 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_9781:40080..40569(+) | ||
Located in intron of: | ENSMEUG00000014656 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | REEP5 | ||
Ensembl ID: | ENSMEUG00000006088 | ||
Aliases: | None | ||
Description: | receptor accessory protein 5 [Source:HGNC Symbol;Acc:30077] |
Percent Identity: | 53.37 % |
Parental protein coverage: | 94.22 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MRERFDQFLHQKNCMTDLLAKIEGKTGVNRSYIALGIIGLVALYLVFGYGASLLCNLIGFGYPAYVSIKA |
....F..FL.QKN..T..L.K.E....V...Y.....I...AL.L.FG..ASL..NLI.F.YPAY.SIKA | |
Retrocopy | LKQCFQRFLEQKNIVTNALGKVEEVSSVKKYYLTTSFIAFLALCLIFGCEASLIYNLIRFIYPAYASIKA |
Parental | IESPNKEDDTQWLTYWVVYGVFSIAEFFSDLFLSWFPFYYMLKCGFLLWCMAPSPSNGAEMLYRRIIRPF |
IE.PNK.DDT..LTY.VVY..F..AEFFSD.FL.WFPF.Y..KC.FLLWCM.P...NG...LY...I.P. | |
Retrocopy | IENPNKNDDTI*LTY*VVYSMFGLAEFFSDIFLFWFPFNYAGKCAFLLWCMLPVVCNGSQILYHCLIHPM |
Parental | FLKHESQMDNVVKDLKDKAKETA |
FL.H...MDN...DL...A..TA | |
Retrocopy | FLRHQASMDNLMIDLSG*ALVTA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Echinops telfairi | ENSETEG00000010270 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006088 | 4 retrocopies | |
Tursiops truncatus | ENSTTRG00000001691 | 1 retrocopy | |
Drosophila melanogaster | FBgn0033906 | 1 retrocopy |