RetrogeneDB ID: | retro_meug_584 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold14124:12080..12412(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MEAF6 | ||
Ensembl ID: | ENSMEUG00000003403 | ||
Aliases: | None | ||
Description: | MYST/Esa1-associated factor 6 [Source:HGNC Symbol;Acc:25674] |
Percent Identity: | 76.32 % |
Parental protein coverage: | 55.72 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | TNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQEQLIE-KREPGSGTESDTSPDFHNQENE |
T...NSNSKNDRRN.KFKE...LFSK.SVT.A..VSALA.VQ.QLIE.KREPGSGT.S..SPDFH.QENE | |
Retrocopy | TTKPNSNSKNDRRN*KFKETK*LFSKCSVTLAVTVSALARVQIQLIE>KREPGSGTKSNISPDFHSQENE |
Parental | PSQEDTEDLEGSVQGVKPQKAASSTSSGSHHSSHKKRK-NKNRH |
PSQEDTEDL..SVQGVKPQKAASS.SSG...SSHK.RK.NKN.H | |
Retrocopy | PSQEDTEDLDASVQGVKPQKAASSISSG--YSSHK*RK>NKNPH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000001927 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000025988 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000013971 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000003403 | 3 retrocopies |
retro_meug_1279, retro_meug_584 , retro_meug_727,
|
Myotis lucifugus | ENSMLUG00000017128 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000006773 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000001916 | 1 retrocopy |