Parental gene: | MEAF6, ENSEEUG00000013971 |
| Aliases: | None |
| Description: | MYST/Esa1-associated factor 6 [Source:HGNC Symbol;Acc:25674] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_6112:1672..16325(-) |
>ENSEEUG00000013971
GAAACACTGGCCAACTTGGAGAGACAGATCTATGCTTTTGAAGGAAGCTATCTGGAAGACACTCAGATGTATGGCAATAT
TATTCGAGGCTGGGACCGGTATCTGACCAACCAAAAAAACTCCAATAGCAAAAACGATCGAAGGAACCGGAAATTTAAGG
AAGCTGAGCGGCTCTTCAGTAAATCCTCAGTTACTTCAGCAGCTGCAGTAAGTGCATTGGCGGGAGTTCAGGACCAGCTC
NNNNNNNNNNGAGAGCCAGGAAGTGGGACAGAAAGTGATACTTCTCCAGACTTCCACAATCAGGAAAATGAGCCCAGCCA
AGAGGACCCTGAGGATCTGGATGGATCTGTGCAAGGAGTGAAACCTCAGAAGGCTGCTTCTTCTACTTCCTCAGGGAGTC
ATCACAGCAGCCATAAAAAACGAAAGAATAAAAACCGACACAGCCCGTCTGGCATGTTTGATTATGACTTTGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATTATTAG
GAAACACTGGCCAACTTGGAGAGACAGATCTATGCTTTTGAAGGAAGCTATCTGGAAGACACTCAGATGTATGGCAATAT
TATTCGAGGCTGGGACCGGTATCTGACCAACCAAAAAAACTCCAATAGCAAAAACGATCGAAGGAACCGGAAATTTAAGG
AAGCTGAGCGGCTCTTCAGTAAATCCTCAGTTACTTCAGCAGCTGCAGTAAGTGCATTGGCGGGAGTTCAGGACCAGCTC
NNNNNNNNNNGAGAGCCAGGAAGTGGGACAGAAAGTGATACTTCTCCAGACTTCCACAATCAGGAAAATGAGCCCAGCCA
AGAGGACCCTGAGGATCTGGATGGATCTGTGCAAGGAGTGAAACCTCAGAAGGCTGCTTCTTCTACTTCCTCAGGGAGTC
ATCACAGCAGCCATAAAAAACGAAAGAATAAAAACCGACACAGCCCGTCTGGCATGTTTGATTATGACTTTGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATTATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .16 RPM |
| SRP017611_kidney | 2 .81 RPM |
| SRP017611_brain | 13 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001927 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000025988 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003403 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000017128 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006773 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000001916 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_362 | 92.62 | 85.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_469 | 95.19 | 60.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_654 | 90.54 | 85.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000013971 retrocopies