RetrogeneDB ID: | retro_mluc_901 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429781:5894362..5894685(-) | ||
Located in intron of: | ENSMLUG00000009219 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ORMDL2 | ||
Ensembl ID: | ENSMLUG00000003575 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.48 % |
Parental protein coverage: | 70.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PVVWTLTNVIHNLAMYVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASF |
P....L.N.IHNL.M.VF.H.VK.TPFET.DQ.KA.LLTHWEQMDYGLQFTS..KFLSIS.I.LYLLASF | |
Retrocopy | PSAFMLNNIIHNLVM*VFQHMVKRTPFETTDQEKAQLLTHWEQMDYGLQFTSFCKFLSISSIALYLLASF |
Parental | YTKYDAAHFLINTTSLLSVLLP-KLPQFHGVRLFGINKY |
Y...DAAHFLIN..SLLS.LLP..L.QF.GV.LFGIN.Y | |
Retrocopy | YAISDAAHFLINIASLLSILLP<YLIQFQGVHLFGINTY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000003047 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000000071 | 8 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000009601 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000015224 | 1 retrocopy | |
Felis catus | ENSFCAG00000013964 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014896 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000010920 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000003575 | 1 retrocopy |
retro_mluc_901 ,
|
Myotis lucifugus | ENSMLUG00000014339 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000006292 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000000911 | 2 retrocopies | |
Mus musculus | ENSMUSG00000025353 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001695 | 2 retrocopies |