RetrogeneDB ID: | retro_nleu_2006 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397322.1:3405280..3405766(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSNLEG00000004537 | ||
Aliases: | None | ||
Description: | 60S ribosomal protein L18 [Source:UniProtKB/TrEMBL;Acc:G1QX20] |
Percent Identity: | 81.1 % |
Parental protein coverage: | 86.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMVIGLLLPGRENKTAVVVGTIT-DDVRVQEV |
LLVKL.R...RRTNSTFNQVVLKRLFM.RTNRPPLSLSRM.....LPG.ENKTAVV.GT...DD.RVQEV | |
Retrocopy | LLVKLCRLPGRRTNSTFNQVVLKRLFMRRTNRPPLSLSRMIRKIKLPGWENKTAVVMGTLK>DDARVQEV |
Parental | PKLKVCALRVTSR-ARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTK |
PKLKVCAL.VTSR.ARS.ILR.GGKILTFDQLALDSP.G.G.VLLSG.RKGR.VYRHFGKA.GTPHSHTK | |
Retrocopy | PKLKVCALPVTSR<ARSGILRVGGKILTFDQLALDSPEGGGPVLLSGLRKGRQVYRHFGKALGTPHSHTK |
Parental | PYVRSKGRKFERARGRRASRGYKN |
PY.RS...KFER.RGRRASRGYKN | |
Retrocopy | PYFRSRDQKFERSRGRRASRGYKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |