RetrogeneDB ID: | retro_nleu_1136 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397282.1:11985763..11986193(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSNLEG00000004537 | ||
Aliases: | None | ||
Description: | 60S ribosomal protein L18 [Source:UniProtKB/TrEMBL;Acc:G1QX20] |
Percent Identity: | 77.4 % |
Parental protein coverage: | 76.06 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | VVLKRLFMSR-TNRPPLSLSRMVIGLLLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRIL |
.VLKRLFMS..TN.PPLSLSRM.....LP..ENKTAVVVGTITDD..VQEVPKLKVC.L.VTSRA.S.I. | |
Retrocopy | IVLKRLFMSA<TNQPPLSLSRMIRKMKLPDQENKTAVVVGTITDDLWVQEVPKLKVCVLGVTSRACSHIV |
Parental | RAGGKILTFDQLALDSPKG-CGTVLLSGPRKGREVYRHFGKA-PGTPHSHTKPYVRSKGRKFERARGRRA |
RAGGK.LTFDQLALDSP....GTVLLSGP.KG.EVYRHF.KA.PG.PHSHTKPYVRSKGRKFERA....A | |
Retrocopy | RAGGKNLTFDQLALDSPRS>PGTVLLSGPCKG*EVYRHFDKA>PGNPHSHTKPYVRSKGRKFERAGSQGA |
Parental | SRGYKN |
S.GYKN | |
Retrocopy | SQGYKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |