RetrogeneDB ID: | retro_ogar_1458 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873548.1:464039..464275(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPP1R11 | ||
Ensembl ID: | ENSOGAG00000001598 | ||
Aliases: | None | ||
Description: | protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:HGNC Symbol;Acc:9285] |
Percent Identity: | 59.3 % |
Parental protein coverage: | 66.67 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AGAGLSETVTETTVTVTTEPENRSLTIKLRKRKPEKKVEWTSDTVDNEHMGRRS-SKCC-CIYEKPRAFG |
A..G..ET.TET..TVT...E.....IK..K.KPEKKVEWTSDTV.....G....S..C.CI.E...AFG | |
Retrocopy | ARPGQAETITET--TVTVTTE----PIKFQKCKPEKKVEWTSDTV*TMNIGGTA<SSKCCCICEIHMAFG |
Parental | ESSTESDEEEEEGCGH |
ESSTES.EEEEEGCGH | |
Retrocopy | ESSTESYEEEEEGCGH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000020710 | 1 retrocopy | |
Felis catus | ENSFCAG00000013592 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000026830 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006493 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000012122 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000016021 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000004933 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001598 | 1 retrocopy |
retro_ogar_1458 ,
|
Pongo abelii | ENSPPYG00000029642 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000017915 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000008330 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000003632 | 1 retrocopy |