RetrogeneDB ID: | retro_pvam_671 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_643:36540..36908(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RSL24D1 | ||
Ensembl ID: | ENSPVAG00000004093 | ||
Aliases: | None | ||
Description: | ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:18479] |
Percent Identity: | 80. % |
Parental protein coverage: | 75.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KKKRNPRKVR-WTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIM |
K.K.N..KVR..TKA.RKAAGKEL.VDNSFEF.K.RNE.VKYQ.ELWNKT.DA.K.V..IKQK.QAKFI. | |
Retrocopy | KEKHNLLKVR<VTKASRKAAGKELSVDNSFEFQKYRNESVKYQQELWNKTNDAIKTVK-IKQKHQAKFII |
Parental | NRLKKNKELQKVQDIKEVKQNIHLIRAPSACKGKLLENKMVQKLQEDVDMEVVSE |
NRLKKNKELQ.V.DIKEVKQNI.LIRAP.ACKGK.LENKMVQKLQ.DVDMEVVSE | |
Retrocopy | NRLKKNKELQQV*DIKEVKQNIYLIRAPFACKGKQLENKMVQKLQQDVDMEVVSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |