RetrogeneDB ID: | retro_sara_195 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_6704:159066..159438(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3 | ||
Ensembl ID: | ENSSARG00000007736 | ||
Aliases: | None | ||
Description: | basic transcription factor 3 [Source:HGNC Symbol;Acc:1125] |
Percent Identity: | 98.41 % |
Parental protein coverage: | 64.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNVNMFTNQGTVIHFNNPKVQASLAANTFTIT |
GTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEE..VNMFTNQGTVIHFNNPKVQASLAANTFTIT | |
Retrocopy | GTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEE--VNMFTNQGTVIHFNNPKVQASLAANTFTIT |
Parental | GHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVP |
GHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVP | |
Retrocopy | GHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |