RetrogeneDB ID: | retro_sara_690 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_259066:86697..87034(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSSARG00000003173 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 73.45 % |
Parental protein coverage: | 78.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFN |
M.QE.LAKLQAQVR.GGKGTARRKKKVVHRTATA.DKKLQ.SLKKL..N.I.G.EEVN.....GTVIH.N | |
Retrocopy | MDQEQLAKLQAQVRTGGKGTARRKKKVVHRTATAGDKKLQFSLKKLGINSISGLEEVNTFTNQGTVIHCN |
Parental | NPKVQASLSANTFAIT-GHAEAKPITEMLPGILSQLGADSLTS |
NPKVQASL.A........HAE.KP.TEML..IL.QLGADSLTS | |
Retrocopy | NPKVQASLVATL*PLN>SHAETKPLTEMLSIILNQLGADSLTS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |