RetrogeneDB ID: | retro_tbel_2747 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_118084:705014..705245(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFV | ||
Ensembl ID: | ENSTBEG00000013840 | ||
Aliases: | None | ||
Description: | H2A histone family, member V [Source:HGNC Symbol;Acc:20664] |
Percent Identity: | 62.34 % |
Parental protein coverage: | 51.33 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | AAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIG |
A....AAILEYLT.E.LEL.GN.SK....K..TP..L.LAI..D.ELDSLI..T.A.GGVI.H.HKSL.G | |
Retrocopy | AVLCCAAILEYLTLEILELTGNVSKI*R*KHVTPHYL*LAIHRDGELDSLINTTNAAGGVITHSHKSLVG |
Parental | KKGQQKT |
KKGQ..T | |
Retrocopy | KKGQKTT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |