RetrogeneDB ID: | retro_tbel_3025 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_126843:279..592(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000000056 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.06 % |
Parental protein coverage: | 60.69 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MALRAAWSLR-AVACS-LRAGPAPAVFCPPRPWR-LRVGPVRTLRTGTDLLSVRKFTEKHEWITTENGIG |
.AL.AAWS...AVAC..L....APAV.CPP.PW...R.G...TL..G..LLSV.KF.EKHEWITTENG.G | |
Retrocopy | VAL*AAWSMQ<AVACT<LCMVMAPAVPCPPQPWQ<TRAGAAQTLCRGPALLSVQKFPEKHEWITTENGTG |
Parental | TVGISNFAQEALGDVVYCSLPEVGTKLNKQDE-FGALES |
TVGIS.FAQ.ALGD.VY.SLPEVGTKLNK....FG..ES | |
Retrocopy | TVGISSFAQGALGDGVYGSLPEVGTKLNKSSV>FGKSES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |