RetrogeneDB ID: | retro_tsyr_772 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_195895:1502..1687(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HMGN2 | ||
Ensembl ID: | ENSTSYG00000011519 | ||
Aliases: | None | ||
Description: | high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:4986] |
Percent Identity: | 69.84 % |
Parental protein coverage: | 72.94 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | SAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKEG-NNPAENGDAKTDQAQKAEGAGDAK |
SAKPA.PKPEP.P.KAPAK...K.P.GKKG..D.GK.G..NP.ENG.AKTD..QKAEGA.DAK | |
Retrocopy | SAKPASPKPEP*PEKAPAKQEQKIPDGKKGEVDTGKAG<DNPTENGNAKTD*VQKAEGARDAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |